RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 A0A1W2PQF6 199 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 E7ENX8 843 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 FBP2O00757 339 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 GSTA4O15217 222 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ADAM23O75077 832 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ERN1O75460 977 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 SEMA4FO95754 770 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CAPN3P20807 821 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 IL10P22301 178 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 HRH2P25021 359 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 MAT2AP31153 395 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 TAF11Q15544 211 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ANXA8L1Q5VT79 327 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 SLCO4C1Q6ZQN7 724 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 LRRC74BQ6ZQY2 392 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 FUNDC1Q8IVP5 155 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PHACTR4Q8IZ21 702 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 TTLQ8NG68 377 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 OR5K2Q8NHB8 316 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 HMGB4Q8WW32 186 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 WDR34Q96EX3 536 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 MRGPRX1Q96LB2 322 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 APOLD1Q96LR9 279 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 KCTD14Q9BQ13 255 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 TACO1Q9BSH4 297 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 ACPTQ9BZG2 426 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 TTYH1Q9H313 450 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 NT5DC2Q9H857 520 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CARS2Q9HA77 564 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 CD248Q9HCU0 757 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 SERGEFQ9UGK8 458 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 FBXL21Q9UKT6 434 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PSMD13Q9UNM6 376 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 OR1A2Q9Y585 309 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PCDHGA7Q9Y5G6 932 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ST14Q9Y5Y6 855 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ANKDD1BA6NHY2 528 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 E7EQ34 232 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 FOXE1O00358 373 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 ZNF217O75362 1048 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ANP32DO95626 131 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 BCKDHAP12694 445 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 HSD17B1P14061 328 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PPIBP23284 216 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 GSTM2P28161 218 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PIK3CBP42338 1070 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 RABIFP47224 123 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CCR8P51685 355 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ABATP80404 500 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CTBSQ01459 385 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CEACAM7Q14002 265 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ZNF658BQ4V348 819 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 MTX3Q5HYI7 312 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PAGE2Q7Z2X7 111 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 GPR180Q86V85 440 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PROSER1Q86XN7 944 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 HID1Q8IV36 788 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ZNF547Q8IVP9 402 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 LILRA3Q8N6C8 439 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 EZH1Q92800 747 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 ZUFSPQ96AP4 578 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CXorf40BQ96DE9 158 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 GBP5Q96PP8 586 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 HBEGFQ99075 208 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 Q9H521 79 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 YY1AP1Q9H869 796 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 IMP3Q9NV31 184 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 ATAD3AQ9NVI7 634 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 TMEM181Q9P2C4 612 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 C15orf41Q9Y2V0 281 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 WBP11Q9Y2W2 641 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 TSC22D4Q9Y3Q8 395 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 TCF20Q9UGU0 1960 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 MYO9BQ13459 2157 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 COL4A3Q01955 1670 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ARHGAP10A1A4S6 786 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 AQP12BA6NM10 295 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 EVPLLA8MZ36 301 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PRAMEF26H0Y7S4 382 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 FCGR1AP12314 374 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 XRCC1P18887 633 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 NDUFV2P19404 249 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 PTX3P26022 381 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 TRPC1P48995 793 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 TAP2Q03519 686 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 TGM3Q08188 693 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ILF3Q12906 894 aaKnown RBP eCLIP5.83□□□□□ -1.48
VPS50-205ENST00000441602 SMAD2Q15796 467 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 UAP1L1Q3KQV9 507 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 LEXMQ3ZCV2 418 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 RFTN2Q52LD8 501 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 PYCR3Q53H96 274 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 KIAA0895LQ68EN5 471 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 CAPRIN2Q6IMN6 1127 aaKnown RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 NOXRED1Q6NXP6 359 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 ENPP7Q6UWV6 458 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 FAM83HQ6ZRV2 1179 aaPredicted RBP5.83□□□□□ -1.48
VPS50-205ENST00000441602 C11orf96Q7Z7L8 435 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 TMEM126BQ8IUX1 230 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 TRIM48Q8IWZ4 208 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms