RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KIAA0513O60268 411 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 PEX11BO96011 259 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 CEACAM8P31997 349 aaPredicted RBP10.37□□□□□ -0.75
RTN4-211ENST00000438462 PPIAP62937 165 aaKnown RBP10.37□□□□□ -0.75
RTN4-211ENST00000438462 PRMT9Q6P2P2 845 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 SARM1Q6SZW1 724 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 RXFP2Q8WXD0 754 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 HGH1Q9BTY7 390 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 RBM24Q9BX46 236 aaKnown RBP10.37□□□□□ -0.75
RTN4-211ENST00000438462 NLRC4Q9NPP4 1024 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 JKAMPQ9P055 326 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 KCNS2Q9ULS6 477 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 ICKQ9UPZ9 632 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 NFS1Q9Y697 457 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 MORC2Q9Y6X9 1032 aaPredicted RBP10.37□□□□□ -0.75
RTN4-211ENST00000438462 RYR2Q92736 4967 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 SLC16A3O15427 465 aaKnown RBP10.36□□□□□ -0.75
RTN4-211ENST00000438462 IGHG3P01860 377 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 MAGP20916 626 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 PLGLB1Q02325 96 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 SLC39A14Q15043 492 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 FAM214AQ32MH5 1076 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 AWAT1Q58HT5 328 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 TCTE1Q5JU00 501 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 CYB5R2Q6BCY4 276 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 TMEM220Q6QAJ8 160 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 SHISA2Q6UWI4 295 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 TRILQ7L0X0 811 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 ARCQ7LC44 396 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 CPEB2Q7Z5Q1 589 aaKnown RBP10.36□□□□□ -0.75
RTN4-211ENST00000438462 BBS5Q8N3I7 341 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 VPS35Q96QK1 796 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 TDRD1Q9BXT4 1180 aaKnown RBP10.36□□□□□ -0.75
RTN4-211ENST00000438462 EPB41L4BQ9H329 900 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 ASB8Q9H765 288 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 TRIM45Q9H8W5 580 aaPredicted RBP10.36□□□□□ -0.75
RTN4-211ENST00000438462 MMP25Q9NPA2 562 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 UBE2TQ9NPD8 197 aaPredicted RBP10.36□□□□□ -0.75
RTN4-211ENST00000438462 RTN4Q9NQC3 1192 aaKnown RBP10.36□□□□□ -0.75
RTN4-211ENST00000438462 ZFATQ9P243 1243 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 STOX2Q9P2F5 926 aaPredicted RBP10.36□□□□□ -0.75
RTN4-211ENST00000438462 NFKBIL1Q9UBC1 381 aaPredicted RBP10.36□□□□□ -0.75
RTN4-211ENST00000438462 NDRG3Q9UGV2 375 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 ACSL5Q9ULC5 683 aa10.36□□□□□ -0.75
RTN4-211ENST00000438462 MED12Q93074 2177 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 PCLOQ9Y6V0 5065 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 IGHV4-30-2A0A087WSY4 118 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 A0A1B0GVC2 190 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 FITM1A5D6W6 292 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 PINLYPA6NC86 204 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 NDC80O14777 642 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 PRLP01236 227 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 POLBP06746 335 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 CCDC166P0CW27 439 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 IGHV4-31P0DP07 118 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 TAS2R50P59544 299 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 RPS4XP62701 263 aaKnown RBP10.35□□□□□ -0.75
RTN4-211ENST00000438462 FOXO1Q12778 655 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 IHHQ14623 411 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 GARNL3Q5VVW2 1013 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 SEZ6L2Q6UXD5 910 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 KIAA0408Q6ZU52 694 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 LILRA3Q8N6C8 439 aaPredicted RBP10.35□□□□□ -0.75
RTN4-211ENST00000438462 SARAFQ96BY9 339 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 TRMT61AQ96FX7 289 aaKnown RBP10.35□□□□□ -0.75
RTN4-211ENST00000438462 USP28Q96RU2 1077 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 SELENOSQ9BQE4 189 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 C11orf70Q9BRQ4 267 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 CNPY3Q9BT09 278 aa10.35□□□□□ -0.75
RTN4-211ENST00000438462 EML4Q9HC35 981 aaKnown RBP10.35□□□□□ -0.75
RTN4-211ENST00000438462 ARMCX3Q9UH62 379 aaPredicted RBP10.35□□□□□ -0.75
RTN4-211ENST00000438462 DNMT3AQ9Y6K1 912 aaPredicted RBP10.35□□□□□ -0.75
RTN4-211ENST00000438462 PMM2O15305 246 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 ITGA10O75578 1167 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 CHRM5P08912 532 aaPredicted RBP10.34□□□□□ -0.75
RTN4-211ENST00000438462 CRYGSP22914 178 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 LOXP28300 417 aaPredicted RBP10.34□□□□□ -0.75
RTN4-211ENST00000438462 MMP13P45452 471 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 CPA2P48052 419 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 MAN2A2P49641 1150 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 HLCSP50747 726 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 IRX6P78412 446 aaPredicted RBP10.34□□□□□ -0.75
RTN4-211ENST00000438462 PRKG2Q13237 762 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 SIX1Q15475 284 aaPredicted RBP10.34□□□□□ -0.75
RTN4-211ENST00000438462 EXT1Q16394 746 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 ATP13A5Q4VNC0 1218 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 FNBP1LQ5T0N5 605 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 DIEXFQ68CQ4 756 aaKnown RBP10.34□□□□□ -0.75
RTN4-211ENST00000438462 RPS19BP1Q86WX3 136 aaKnown RBP10.34□□□□□ -0.75
RTN4-211ENST00000438462 JOSD2Q8TAC2 188 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 M1APQ8TC57 530 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 BRSK1Q8TDC3 778 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 METTL21AQ8WXB1 218 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 CENPIQ92674 756 aaPredicted RBP10.34□□□□□ -0.75
RTN4-211ENST00000438462 ZNF653Q96CK0 615 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 ART5Q96L15 291 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 ZNF285Q96NJ3 590 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 WDR83Q9BRX9 315 aaKnown RBP10.34□□□□□ -0.75
RTN4-211ENST00000438462 ZNF747Q9BV97 191 aa10.34□□□□□ -0.75
RTN4-211ENST00000438462 NT5MQ9NPB1 228 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms