RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 GPR149Q86SP6 731 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 CALHM3Q86XJ0 350 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 C8orf59Q8N0T1 100 aaPredicted RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 GLB1L3Q8NCI6 653 aaPredicted RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 OR2AP1Q8NGE2 309 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 EBPLQ9BY08 206 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 SLC32A1Q9H598 525 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 RDH14Q9HBH5 336 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 SLC22A14Q9Y267 594 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 ZNF106Q9H2Y7 1883 aaKnown RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 TRIM64BA6NI03 449 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 ZSCAN5BA6NJL1 495 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 TEX28O15482 410 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 MAN1A2O60476 641 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 WDR47O94967 919 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 DIRAS1O95057 198 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 MFN2O95140 757 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 OLFM2O95897 454 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 HOXB9P17482 250 aaPredicted RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 EFNA1P20827 205 aaPredicted RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 NSG1P42857 185 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 MAD2L1Q13257 205 aaPredicted RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 C6orf141Q5SZD1 244 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 TPGS2Q68CL5 300 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 PJA1Q8NG27 643 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 FOXJ1Q92949 421 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 ASIC4Q96FT7 647 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 APOLD1Q96LR9 279 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 P2RY13Q9BPV8 354 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 ATG10Q9H0Y0 220 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 TRIM39Q9HCM9 518 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 HECAQ9UBI9 543 aaPredicted RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 COL4A6Q14031 1691 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 KCNE1BA0A087WTH5 132 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 CCRL2O00421 344 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 SEC14L2O76054 403 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 HLA-FP30511 346 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 CLK3P49761 638 aaKnown RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 VAC14Q08AM6 782 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 BOP1Q14137 746 aaKnown RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 GPR33Q49SQ1 333 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 OR4F3Q6IEY1 312 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 GALNT5Q7Z7M9 940 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 BEND7Q8N7W2 519 aaPredicted RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 VWCEQ96DN2 955 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 FAM120BQ96EK7 910 aaKnown RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 COPS8Q99627 209 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 DGCR6LQ9BY27 220 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 YTHDF1Q9BYJ9 559 aaKnown RBP10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 ABCB8Q9NUT2 735 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 TBC1D14Q9P2M4 693 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 DGKBQ9Y6T7 804 aa10.12□□□□□ -0.79
CLSTN1-203ENST00000435891 OBSL1O75147 1896 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 PTGES3LE9PB15 166 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 XPNPEP2O43895 674 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 ABCB7O75027 752 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 SOCS5O75159 536 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 XYLBO75191 536 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 IGSF6O95976 241 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 INHBBP09529 407 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 NAT2P11245 290 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 SERPINA4P29622 427 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 SERPINB1P30740 379 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 PLA2G16P53816 162 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 CLDN8P56748 225 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 ISL1P61371 349 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 CARD16Q5EG05 197 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 BROXQ5VW32 411 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 GTF2IRD2BQ6EKJ0 949 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 GTF2IRD2Q86UP8 949 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 FAM217AQ8IXS0 508 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 CNIH3Q8TBE1 160 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 SCRN2Q96FV2 425 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 KCTD5Q9NXV2 234 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 ZDHHC3Q9NYG2 299 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 SLCO3A1Q9UIG8 710 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 ABCG2Q9UNQ0 655 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 GPSM3Q9Y4H4 160 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 CORINQ9Y5Q5 1042 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 PER2O15055 1255 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 SCELO95171 688 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 KRT6AP02538 564 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 KRT6BP04259 564 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 UGT2B4P06133 528 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 CHRNB1P11230 501 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 MAGP20916 626 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 PRKACBP22694 351 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 AOAHP28039 575 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 S100A3P33764 101 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 KRT6CP48668 564 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 GRSF1Q12849 480 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 RAB33AQ14088 237 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 E2F2Q14209 437 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 LRIF1Q5T3J3 769 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 ZNF648Q5T619 568 aaPredicted RBP10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 ASTLQ6HA08 431 aaPredicted RBP10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 ADNP2Q6IQ32 1131 aa10.11□□□□□ -0.79
CLSTN1-203ENST00000435891 DOK6Q6PKX4 331 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms