RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 KCNJ9Q92806 393 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 PRTFDC1Q9NRG1 225 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 PDP1Q9P0J1 537 aaPredicted RBP15.22■□□□□ 0.03
NEDD4-202ENST00000435532 ZNF37AP17032 561 aaPredicted RBP15.22■□□□□ 0.03
NEDD4-202ENST00000435532 HOXD13P35453 343 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 CTSKP43235 329 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 LIPEQ05469 1076 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 NR0B2Q15466 257 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 FAM26DQ5JW98 314 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 AAGABQ6PD74 315 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 GPRIN1Q7Z2K8 1008 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 TDHQ8IZJ6 230 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 RFKQ969G6 155 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 NXPE3Q969Y0 559 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 MMABQ96EY8 250 aaPredicted RBP15.22■□□□□ 0.03
NEDD4-202ENST00000435532 MUSKO15146 869 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 TMEM63AO94886 807 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 TTKP33981 857 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 OGDHQ02218 1023 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 SPANXN2Q5MJ10 180 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 ASPGQ86U10 573 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 ESAMQ96AP7 390 aa15.22■□□□□ 0.03
NEDD4-202ENST00000435532 BEST1O76090 585 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 ADRB3P13945 408 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 ACRV1P26436 265 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 RHAGQ02094 409 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 GFM1Q96RP9 751 aaKnown RBP15.21■□□□□ 0.03
NEDD4-202ENST00000435532 CLCC1Q96S66 551 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 SYNGR4O95473 234 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 EBLN1P0CF75 366 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 DNASE1L1P49184 302 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 TMED10P49755 219 aaKnown RBP15.21■□□□□ 0.03
NEDD4-202ENST00000435532 SLC9B1Q4ZJI4 515 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 CILP2Q8IUL8 1156 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 RNF31Q96EP0 1072 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 FCRL4Q96PJ5 515 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 RASSF1Q9NS23 344 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 PCDHGB5Q9Y5G0 923 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 RGPD1P0DJD0 1748 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 LCHNA4D1U4 455 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 SNX4O95219 450 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 LYNP07948 512 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 VSX2P58304 361 aaPredicted RBP15.21■□□□□ 0.03
NEDD4-202ENST00000435532 C1orf61Q13536 156 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 TMEM25Q86YD3 366 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 C1orf52Q8N6N3 182 aaKnown RBP15.21■□□□□ 0.03
NEDD4-202ENST00000435532 VN1R2Q8NFZ6 395 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 OR2T34Q8NGX1 318 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 TSEN15Q8WW01 171 aaKnown RBP15.21■□□□□ 0.03
NEDD4-202ENST00000435532 MOAP1Q96BY2 351 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 IMP4Q96G21 291 aaKnown RBP15.21■□□□□ 0.03
NEDD4-202ENST00000435532 LRMDAQ9H2I8 198 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 SALL4Q9UJQ4 1053 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 HCN2Q9UL51 889 aa15.21■□□□□ 0.03
NEDD4-202ENST00000435532 LDB2O43679 373 aa15.21■□□□□ 0.02
NEDD4-202ENST00000435532 SCAPQ12770 1279 aa15.21■□□□□ 0.02
NEDD4-202ENST00000435532 FAM174BQ3ZCQ3 159 aa15.21■□□□□ 0.02
NEDD4-202ENST00000435532 DNM1P34Q6PK57 102 aa15.21■□□□□ 0.02
NEDD4-202ENST00000435532 IPCEF1Q8WWN9 437 aaPredicted RBP15.21■□□□□ 0.02
NEDD4-202ENST00000435532 MIEF2Q96C03 454 aa15.21■□□□□ 0.02
NEDD4-202ENST00000435532 RBM4BQ9BQ04 359 aaKnown RBP15.21■□□□□ 0.02
NEDD4-202ENST00000435532 RBM4Q9BWF3 364 aaKnown RBP15.21■□□□□ 0.02
NEDD4-202ENST00000435532 KLHL25Q9H0H3 589 aa15.21■□□□□ 0.02
NEDD4-202ENST00000435532 PDLIM7Q9NR12 457 aa15.21■□□□□ 0.02
NEDD4-202ENST00000435532 FARSBQ9NSD9 589 aaKnown RBP15.21■□□□□ 0.02
NEDD4-202ENST00000435532 TMEM59LQ9UK28 342 aa15.21■□□□□ 0.02
NEDD4-202ENST00000435532 ENDOUP21128 410 aaKnown RBP15.2■□□□□ 0.02
NEDD4-202ENST00000435532 DRD4P21917 467 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 ARHGAP8P85298 464 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 TMEM44Q2T9K0 475 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 ASTE1Q2TB18 679 aaPredicted RBP15.2■□□□□ 0.02
NEDD4-202ENST00000435532 PDCD4Q53EL6 469 aaKnown RBP15.2■□□□□ 0.02
NEDD4-202ENST00000435532 TRMT10BQ6PF06 316 aaKnown RBP15.2■□□□□ 0.02
NEDD4-202ENST00000435532 ANKRD46Q86W74 232 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 PGAM4Q8N0Y7 254 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 KBTBD8Q8NFY9 601 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 AP3S1Q92572 193 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 TRMT2BQ96GJ1 504 aaKnown RBP15.2■□□□□ 0.02
NEDD4-202ENST00000435532 TRAPPC9Q96Q05 1148 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 SLCO1B3Q9NPD5 702 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 SLC2A6Q9UGQ3 507 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 SSR3Q9UNL2 185 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 LTBP4Q8N2S1 1624 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 NUP98P52948 1817 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 NME6O75414 186 aaPredicted RBP15.2■□□□□ 0.02
NEDD4-202ENST00000435532 OR5F1O95221 314 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 CDH1P12830 882 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 CDK9P50750 372 aaKnown RBP15.2■□□□□ 0.02
NEDD4-202ENST00000435532 DSTNP60981 165 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 SCARB2Q14108 478 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 DPYSQ14117 519 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 NCEH1Q6PIU2 408 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 GOLGA7Q7Z5G4 137 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 TRIM74Q86UV6 250 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 FAM174AQ8TBP5 190 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 SNX33Q8WV41 574 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 NUAK2Q9H093 628 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 LRCH1Q9Y2L9 728 aa15.2■□□□□ 0.02
NEDD4-202ENST00000435532 NHSQ6T4R5 1651 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms