RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OR2T5Q6IEZ7 315 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 PAQR3Q6TCH7 311 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 Q6ZSR9 355 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ANKS3Q6ZW76 656 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 PLCZ1Q86YW0 608 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ATPAF2Q8N5M1 289 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 OR2T29Q8NH02 315 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 OR52J3Q8NH60 311 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 TTC9Q92623 222 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 GGHQ92820 318 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 FBXW5Q969U6 566 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 FAM129BQ96TA1 746 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 STRCP1A6NGW2 1772 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ARID2Q68CP9 1835 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 STMND1H3BQB6 276 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 GFRA2O00451 464 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 BTN3A1O00481 513 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 C1QCP02747 245 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 MSL3P1P0C860 447 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CKMT1AP12532 417 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ARF4P18085 180 aaPredicted RBP7.27□□□□□ -1.25
CPSF6-202ENST00000435070 AQP1P29972 269 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 HOXA9P31269 272 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 MGAT3Q09327 533 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 NPRL3Q12980 569 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 FGFBP1Q14512 234 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 LY6KQ17RY6 165 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 FAM171A1Q5VUB5 890 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CFAP77Q6ZQR2 320 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 SLC13A3Q8WWT9 602 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 TKTL2Q9H0I9 626 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 ING3Q9NXR8 418 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 CFL2Q9Y281 166 aa7.27□□□□□ -1.25
CPSF6-202ENST00000435070 FABP12A6NFH5 140 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 C4BPBP20851 252 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 UBA1P22314 1058 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 CCR1P32246 355 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 HMGCS1Q01581 520 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 HYAL2Q12891 473 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 GARNL3Q5VVW2 1013 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 LAMTOR1Q6IAA8 161 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TMEM65Q6PI78 240 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 KRT77Q7Z794 578 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ZDHHC17Q8IUH5 632 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 APH1BQ8WW43 257 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TMEM203Q969S6 136 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TESCQ96BS2 214 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TOE1Q96GM8 510 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 CCDC59Q9P031 241 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF70Q9UC06 446 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ATP6V1HQ9UI12 483 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 FAM240BA0A1B0GVZ2 78 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 NPEPPSL1A6NEC2 478 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 YJEFN3A6XGL0 299 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 NT5C1B-RDH14C9J2C7 533 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TEX46H3BTG2 121 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 FZD9O00144 591 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ACSL4O60488 711 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ANXA9O76027 345 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ITGAMP11215 1152 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SDHBP21912 280 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 AKT1P31749 480 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 GRM7Q14831 915 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TARBP2Q15633 366 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 GPR68Q15743 365 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 C18orf21Q32NC0 220 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TSPYL5Q86VY4 417 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 CILP2Q8IUL8 1156 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 CPA6Q8N4T0 437 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 PYURFQ96I23 114 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 MGLLQ99685 303 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ACTL8Q9H568 366 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 DCAF13Q9NV06 445 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 NINQ8N4C6 2090 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ECI2O75521 394 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 HLA-DQB2P05538 268 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SSTR2P30874 369 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SOX3P41225 446 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 BTN3A2P78410 334 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 CAPN13Q6MZZ7 669 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 COMMD7Q86VX2 200 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 BLOC1S5Q8TDH9 187 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 IPCEF1Q8WWN9 437 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TRAF4Q9BUZ4 470 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SPATA9Q9BWV2 254 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 NIFKQ9BYG3 293 aaKnown RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 ULBP1Q9BZM6 244 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 GORASP2Q9H8Y8 452 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SLC25A37Q9NYZ2 338 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 COL1A2P08123 1366 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 TEX51A0A1B0GUA7 166 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 SMCO3A2RU48 225 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 PLOD3O60568 738 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 GPX5O75715 221 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 VTNP04004 478 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 EFNA1P20827 205 aaPredicted RBP7.26□□□□□ -1.25
CPSF6-202ENST00000435070 MAN2A2P49641 1150 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 CXCR4P61073 352 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 BNC1Q01954 994 aa7.26□□□□□ -1.25
CPSF6-202ENST00000435070 CAMK2GQ13555 558 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms