RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 hCG_1807616A0A1W2PRN6 198 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 TMEM221A6NGB7 291 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 K7ENM7 598 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 P4HA2O15460 535 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 PTP4A3O75365 173 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 DNTTP04053 509 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 CLTBP09497 229 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 POU5F1Q01860 360 aaKnown RBP2.83□□□□□ -1.96
PTPN4-205ENST00000433888 ODF4Q2M2E3 257 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 EIPR1Q53HC9 387 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 SPECC1Q5M775 1068 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 ELFN2Q5R3F8 820 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 CFAP58Q5T655 872 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 LEKR1Q6ZMV7 388 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 ZNF841Q6ZN19 808 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 AACSQ86V21 672 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 CDK20Q8IZL9 346 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 SUMF1Q8NBK3 374 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 RFT1Q96AA3 541 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 RSRC1Q96IZ7 334 aaKnown RBP2.83□□□□□ -1.96
PTPN4-205ENST00000433888 SPAG5Q96R06 1193 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 SPATC1LQ9H0A9 340 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 B3GAT2Q9NPZ5 323 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 FAM207AQ9NSI2 230 aaPredicted RBP2.83□□□□□ -1.96
PTPN4-205ENST00000433888 VPS28Q9UK41 221 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 PLAGL1Q9UM63 463 aa2.83□□□□□ -1.96
PTPN4-205ENST00000433888 TDRD6O60522 2096 aaKnown RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 ZNF840PA6NDX5 716 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 B4DLN1 442 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 TFECO14948 347 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 PAPSS1O43252 624 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 SNAP91O60641 907 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 GALR3O60755 368 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 DARSP14868 501 aaKnown RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 ARF3P61204 181 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 SIRPAP78324 504 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 TMF1P82094 1093 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 ARF1P84077 181 aaKnown RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 MAT1AQ00266 395 aaKnown RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 EXT1Q16394 746 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 SLC35D3Q5M8T2 416 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 MFSD4BQ5TF39 518 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 SPATA1Q5VX52 437 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 DMKNQ6E0U4 476 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 VITQ6UXI7 678 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 FAM47EQ6ZV65 393 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 HAUS6Q7Z4H7 955 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 SLC25A42Q86VD7 318 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 C17orf53Q8N3J3 647 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 AFAP1Q8N556 730 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 NPRL2Q8WTW4 380 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 CNRIP1Q96F85 164 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 SERINC2Q96SA4 455 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 LGMNQ99538 433 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 MAP3K3Q99759 626 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 AP1M1Q9BXS5 423 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 HRH4Q9H3N8 390 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 Q9N2K0 584 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 EIF2B3Q9NR50 452 aaKnown RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 RPS6KA6Q9UK32 745 aa2.82□□□□□ -1.96
PTPN4-205ENST00000433888 ZNF215Q9UL58 517 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 MAGED1Q9Y5V3 778 aaPredicted RBP2.82□□□□□ -1.96
PTPN4-205ENST00000433888 IGHV4-30-2A0A087WSY4 118 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 ANKUB1A6NFN9 424 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 LRRC72A6NJI9 287 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 H0YAE9 185 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 LRCH4O75427 683 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 POP4O95707 220 aaKnown RBP2.81□□□□□ -1.96
PTPN4-205ENST00000433888 STARD3NLO95772 234 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 OR2T7P0C7T2 308 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 PORP16435 677 aaPredicted RBP2.81□□□□□ -1.96
PTPN4-205ENST00000433888 PDHA2P29803 388 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 CAPGP40121 348 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 MNDAP41218 407 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 GARSP41250 739 aaKnown RBP2.81□□□□□ -1.96
PTPN4-205ENST00000433888 CLCN4P51793 760 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 MC1RQ01726 317 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 TAB1Q15750 504 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 C3AR1Q16581 482 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 C1QTNF12Q5T7M4 302 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 NOTUMQ6P988 496 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 Q6ZVH6 145 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 FAM131BQ86XD5 332 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 CEP57Q86XR8 500 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 TTC39CQ8N584 583 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 LSMEM1Q8N8F7 131 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 KLHL30-AS1Q8NEE0 82 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 SCFD2Q8WU76 684 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 HOXD1Q9GZZ0 328 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 MIS12Q9H081 205 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 SLITRK2Q9H156 845 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 TRPV4Q9HBA0 871 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 SEC63Q9UGP8 760 aaKnown RBP2.81□□□□□ -1.96
PTPN4-205ENST00000433888 STYXL1Q9Y6J8 313 aa2.81□□□□□ -1.96
PTPN4-205ENST00000433888 RSF1Q96T23 1441 aaPredicted RBP2.81□□□□□ -1.96
PTPN4-205ENST00000433888 PTGES3LE9PB15 166 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 G3V2L1 256 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 PRAMEF11O60813 436 aa2.8□□□□□ -1.96
PTPN4-205ENST00000433888 SMIM18P0DKX4 95 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms