RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 HMX3A6NHT5 357 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 GFRA2O00451 464 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 PKMP14618 531 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 UQCRC1P31930 480 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 GNPDA1P46926 289 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 CPSF6Q16630 551 aaKnown RBP eCLIP11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 GPAT3Q53EU6 434 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 INO80DQ53TQ3 878 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 PSAPL1Q6NUJ1 521 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 TMPRSS11AQ6ZMR5 421 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 GLT6D1Q7Z4J2 308 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 BPHLQ86WA6 291 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 ARRDC2Q8TBH0 407 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 POPDC3Q9HBV1 291 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 GABRQQ9UN88 632 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 ZNF646O15015 1829 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 LCTP09848 1927 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 CLCA1A8K7I4 914 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 RFXANKO14593 260 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 AKR7A2O43488 359 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 NBNO60934 754 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 SCO1O75880 301 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 KRT6AP02538 564 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 KRT6BP04259 564 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 TIE1P35590 1138 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 LHX1P48742 406 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 TJAP1Q5JTD0 557 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 SDHAF4Q5VUM1 108 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 ZNF621Q6ZSS3 439 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 CCDC190Q86UF4 302 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 PIANPQ8IYJ0 282 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 HSH2DQ96JZ2 352 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 VPS35Q96QK1 796 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 PAAF1Q9BRP4 392 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 LRTM1Q9HBL6 345 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 IMPAD1Q9NX62 359 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 PSORS1C1Q9UIG5 152 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 GRIP1Q9Y3R0 1128 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 PCDHB5Q9Y5E4 795 aa11.24□□□□□ -0.61
HMGCS1-202ENST00000433297 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 MUSKO15146 869 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 CDK1P06493 297 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 NRIP1P48552 1158 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 MRPL19P49406 292 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 YIF1BQ5BJH7 314 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 FAM131AQ6UXB0 335 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 LAX1Q8IWV1 398 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 RGL4Q8IZJ4 473 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 COQ8BQ96D53 544 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 GPRC5BQ9NZH0 403 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 RLFQ13129 1914 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 FAM220BPB1ANY3 271 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 SMLR1H3BR10 107 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 CCNDBP1O95273 360 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 CPSF4O95639 269 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 OTCP00480 354 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 ITGA2P17301 1181 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 OGNP20774 298 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 SSTR4P31391 388 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 ACVRL1P37023 503 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 MAGEA11P43364 429 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 FCHO2Q0JRZ9 810 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 VGLL4Q14135 290 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 TBCEQ15813 527 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 PTCHD3Q3KNS1 767 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 ATG9BQ674R7 924 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 NLRP8Q86W28 1048 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 AMIGO1Q86WK6 493 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 MIB1Q86YT6 1006 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 SLC7A6Q92536 515 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 CCDC120Q96HB5 630 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 CCDC59Q9P031 241 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 LOC285095A0A1B0GVY8 99 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 PTGESO14684 152 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 ERN1O75460 977 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 SBF1O95248 1867 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 WEE1P30291 646 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 MLLT6P55198 1093 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 CASP9P55211 416 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 PIK3R6Q5UE93 754 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 OVOS1Q6IE37 1185 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 MSANTD2Q6P1R3 559 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 SLC44A2Q8IWA5 706 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 SPPL2AQ8TCT8 520 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 LPPQ93052 612 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 MGLLQ99685 303 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 CCDC32Q9BV29 185 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 UCK2Q9BZX2 261 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 POLR1EQ9GZS1 481 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 MKRN2Q9H000 416 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 SMURF1Q9HCE7 757 aa11.23□□□□□ -0.61
HMGCS1-202ENST00000433297 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms