RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ZNF304Q9HCX3 659 aa13.61□□□□□ -0.23
SMARCE1-205ENST00000431889 ARHGEF33A8MVX0 844 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 H0YGG7 62 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 GOLGA8MH3BSY2 632 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 ARF3P61204 181 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 EEF1A2Q05639 463 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 KCNJ11Q14654 390 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 CCNG2Q16589 344 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 TCTE1Q5JU00 501 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 AGAP7PQ5VUJ5 663 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 ANKRD22Q5VYY1 191 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 FBXO42Q6P3S6 717 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 KCNMB4Q86W47 210 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 HPS6Q86YV9 775 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 RNF10Q8N5U6 811 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 LPGAT1Q92604 370 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 FKBP10Q96AY3 582 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 MIEF2Q96C03 454 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 CABS1Q96KC9 395 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 AGAP4Q96P64 663 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 CUEDC1Q9NWM3 386 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 PTGFRNQ9P2B2 879 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 OSGIN2Q9Y236 505 aa13.6□□□□□ -0.23
SMARCE1-205ENST00000431889 CENPEQ02224 2701 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 IGKV1-8A0A0C4DH67 115 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 CEP104O60308 925 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 SYF2O95926 243 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 CD63P08962 238 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 ZGLP1P0C6A0 271 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 ERVK-10P10266 1014 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 DCTP40126 519 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 MAT1AQ00266 395 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 KLHL38Q2WGJ6 581 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 CASC4Q6P4E1 433 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 MAMDC2Q7Z304 686 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 TXLNBQ8N3L3 684 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 SIRT6Q8N6T7 355 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 TM9SF4Q92544 642 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 ZUFSPQ96AP4 578 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 MAGEB10Q96LZ2 347 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 C5orf34Q96MH7 638 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 ZNF285Q96NJ3 590 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 PKP4Q99569 1192 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 MACROD1Q9BQ69 325 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 FRMD8P1Q9BZ68 369 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 IL22Q9GZX6 179 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 WDR54Q9H977 334 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 BFARQ9NZS9 450 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 TAC3Q9UHF0 121 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 C3orf18Q9UK00 162 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 SLC5A6Q9Y289 635 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 SVILO95425 2214 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 HEATR5BQ9P2D3 2071 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 UNC79Q9P2D8 2635 aa13.59□□□□□ -0.23
SMARCE1-205ENST00000431889 FITM1A5D6W6 292 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 VSTM2BA6NLU5 285 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 IGHEP01854 428 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 ALBP02768 609 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 PIM1P11309 404 aaPredicted RBP13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 NPY2RP49146 381 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 EFNA3P52797 238 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 FAM214AQ32MH5 1076 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 IRAK1BP1Q5VVH5 260 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 CENPUQ71F23 418 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 ADCK2Q7Z695 626 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 DENND6AQ8IWF6 608 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 FOPNLQ96NB1 174 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 KIFC1Q9BW19 673 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 LHPPQ9H008 270 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 MRPS30Q9NP92 439 aaKnown RBP13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 EIF2B3Q9NR50 452 aaKnown RBP13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 FBXO6Q9NRD1 293 aaPredicted RBP13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 TRPC4Q9UBN4 977 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 RUVBL1Q9Y265 456 aaKnown RBP13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 FAM169AQ9Y6X4 670 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 SCN3AQ9NY46 2000 aa13.58□□□□□ -0.23
SMARCE1-205ENST00000431889 ZGRF1Q86YA3 2104 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 OR2W5A6NFC9 320 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 TARM1B6A8C7 271 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 P2RX6O15547 441 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 LRRTM2O43300 516 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 CMPK1P30085 196 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 RPA3P35244 121 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 SOX8P57073 446 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 OCA2Q04671 838 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 GPS1Q13098 491 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 CTBP1Q13363 440 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 ZNF169Q14929 603 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 B3GNTL1Q67FW5 361 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 LRRC8BQ6P9F7 803 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 RNF44Q7L0R7 432 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 RAB42Q8N4Z0 105 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 OR9A1PQ8NGU1 263 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 BRIX1Q8TDN6 353 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-205ENST00000431889 MS4A14Q96JA4 679 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms