RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 SLCO4C1Q6ZQN7 724 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 TRIM69Q86WT6 500 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 PGBD3Q8N328 593 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 GLB1L3Q8NCI6 653 aaPredicted RBP13.84□□□□□ -0.19
CALD1-207ENST00000430085 DENND6BQ8NEG7 585 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 FLCNQ8NFG4 579 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 OR2T34Q8NGX1 318 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 WDR20Q8TBZ3 569 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 PYDC1Q8WXC3 89 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 MTERF1Q99551 399 aaKnown RBP13.84□□□□□ -0.19
CALD1-207ENST00000430085 GPATCH1Q9BRR8 931 aaKnown RBP13.84□□□□□ -0.19
CALD1-207ENST00000430085 POLMQ9NP87 494 aaPredicted RBP13.84□□□□□ -0.19
CALD1-207ENST00000430085 SUCOQ9UBS9 1254 aaKnown RBP13.84□□□□□ -0.19
CALD1-207ENST00000430085 PLAGL1Q9UM63 463 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 SUFUQ9UMX1 484 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 KCNK6Q9Y257 313 aa13.84□□□□□ -0.19
CALD1-207ENST00000430085 ASPDHA6ND91 283 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 SHISA7A6NL88 538 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 ZNF839A8K0R7 811 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 NPIPB8E9PQR5 432 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 MAN2B1O00754 1011 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 BAG2O95816 211 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 PRPS2P11908 318 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 BCKDHAP12694 445 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 HSD3B1P14060 373 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 PCSK2P16519 638 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 HSD3B2P26439 372 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 HSD17B2P37059 387 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 CAPRIN1Q14444 709 aaKnown RBP13.83□□□□□ -0.2
CALD1-207ENST00000430085 NUMA1Q14980 2115 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 USP39Q53GS9 565 aaKnown RBP13.83□□□□□ -0.2
CALD1-207ENST00000430085 PYCR3Q53H96 274 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 PAGE2BQ5JRK9 111 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 MED27Q6P2C8 311 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 LRRC56Q8IYG6 542 aaPredicted RBP13.83□□□□□ -0.2
CALD1-207ENST00000430085 FAM156AQ8NDB6 213 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 SETD7Q8WTS6 366 aaKnown RBP13.83□□□□□ -0.2
CALD1-207ENST00000430085 ASB9Q96DX5 294 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 IL17FQ96PD4 163 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 TACO1Q9BSH4 297 aaKnown RBP13.83□□□□□ -0.2
CALD1-207ENST00000430085 EFCAB11Q9BUY7 163 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 VPS29Q9UBQ0 182 aa13.83□□□□□ -0.2
CALD1-207ENST00000430085 PRORSD1PA6NEY8 169 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 LATO43561 262 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 BCAS2O75934 225 aaPredicted RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 STAMBPO95630 424 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 NPPAP01160 153 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 ANPEPP15144 967 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 CLDN2P57739 230 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 TRIM25Q14258 630 aaKnown RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 ARHGAP19Q14CB8 494 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 TLR1Q15399 786 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 MLF2Q15773 248 aaPredicted RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 HIST2H2ACQ16777 129 aaPredicted RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 PAGE3Q5JUK9 113 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 PRAMEF14Q5SWL7 426 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 PRAMEF13Q5VWM6 474 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 ATG9BQ674R7 924 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 HIST2H2AA3Q6FI13 130 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 CAPRIN2Q6IMN6 1127 aaKnown RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 ZNF852Q6ZMS4 543 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.82□□□□□ -0.2
CALD1-207ENST00000430085 TBC1D21Q8IYX1 336 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 RAB42Q8N4Z0 105 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 LMNTD1Q8N9Z9 388 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 BHLHE22Q8NFJ8 381 aaPredicted RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 SLC5A11Q8WWX8 675 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 APIPQ96GX9 242 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 APOLD1Q96LR9 279 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 C12orf66Q96MD2 445 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 FERD3LQ96RJ6 166 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 HAUS8Q9BT25 410 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 EHD1Q9H4M9 534 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 BRF2Q9HAW0 419 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 POM121BA6NF01 834 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 FXYD1O00168 92 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 IL6P05231 212 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 HOXC4P09017 264 aaPredicted RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 C1GALT1C1LP0DN25 315 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 ACPPP15309 386 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 AMD1P17707 334 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 IDSP22304 550 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 HNRNPA2B1P22626 353 aaKnown RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 DGKQP52824 942 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 ATXN3P54252 364 aaPredicted RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 KIAA1024LP59773 190 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 MS4A2Q01362 244 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 E2F2Q14209 437 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 SLBPQ14493 270 aaKnown RBP eCLIP13.82□□□□□ -0.2
CALD1-207ENST00000430085 CATSPEREQ5SY80 951 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 SLC2A7Q6PXP3 512 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 RNF175Q8N4F7 328 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 C2orf73Q8N5S3 287 aaPredicted RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 OR7G3Q8NG95 312 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 WDR34Q96EX3 536 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 CARS2Q9HA77 564 aaKnown RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 EBF2Q9HAK2 575 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 SPATA6Q9NWH7 488 aaPredicted RBP13.82□□□□□ -0.2
CALD1-207ENST00000430085 SPATA7Q9P0W8 599 aa13.82□□□□□ -0.2
CALD1-207ENST00000430085 ABCD2Q9UBJ2 740 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms