RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 SLC28A2O43868 658 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 C9P02748 559 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 GPR17Q13304 367 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 QPRTQ15274 297 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 CYP27C1Q4G0S4 372 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 RAET1GQ6H3X3 334 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 CAPN13Q6MZZ7 669 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 LUZP2Q86TE4 346 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 RAB43Q86YS6 212 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 SLC29A3Q9BZD2 475 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 KLHL1Q9NR64 748 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 KLHL28Q9NXS3 571 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 TRAV19A0A0A6YYK7 116 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 NEDD8-MDP1E9PL57 170 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 TPST2O60704 377 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 VIPP01282 170 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 ATXN1LP0C7T5 689 aaKnown RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 BUD31P41223 144 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 OR1E2P47887 323 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 GATMP50440 423 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 TEAD4Q15561 434 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 ATG9BQ674R7 924 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 SERINC5Q86VE9 423 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 NETO1Q8TDF5 533 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 DIRAS2Q96HU8 199 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 CLCA2Q9UQC9 943 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 PCDHA9Q9Y5H5 950 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 COL24A1Q17RW2 1714 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 CCNB2O95067 398 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 ITGBL1O95965 494 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 PDYNP01213 254 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF865P0CJ78 1059 aaPredicted RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 PAICSP22234 425 aaKnown RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 GTF2E2P29084 291 aaKnown RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 RPL3P39023 403 aaKnown RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 CSNK2BP67870 215 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 RPP38P78345 283 aaKnown RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 NFATC2Q13469 925 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 IL18R1Q13478 541 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 CLCA4Q14CN2 919 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 BEND5Q7L4P6 421 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 MINDY2Q8NBR6 621 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 FNDC11Q9BVV2 318 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 KCNH6Q9H252 994 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 TUBB1Q9H4B7 451 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 CTPS2Q9NRF8 586 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 DUS2Q9NX74 493 aaKnown RBP12.3□□□□□ -0.44
CPNE4-201ENST00000429747 ZDHHC3Q9NYG2 299 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
CPNE4-201ENST00000429747 COL5A3P25940 1745 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-201ENST00000429747 LOC285095A0A1B0GVY8 99 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 PRR23D1E9PI22 279 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-201ENST00000429747 PDE9AO76083 593 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 ELFN1P0C7U0 828 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 PRR23D2P0DMB1 279 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-201ENST00000429747 ANXA8P13928 327 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 KDELR2P33947 212 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 GPR1P46091 355 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 RGRP47804 291 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 ITGA1P56199 1179 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 PTPRRQ15256 657 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 TXNDC8Q6A555 127 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 TNFAIP8L2Q6P589 184 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-201ENST00000429747 TBC1D15Q8TC07 691 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 NUDT8Q8WV74 236 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 TRIM63Q969Q1 353 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 ACDQ96AP0 544 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF558Q96NG5 402 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 RPRD1BQ9NQG5 326 aaKnown RBP12.29□□□□□ -0.44
CPNE4-201ENST00000429747 SEC14L3Q9UDX4 400 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 VPS51Q9UID3 782 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 K7ERQ8 282 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 MUSKO15146 869 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 MED27Q6P2C8 311 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 NEK5Q6P3R8 708 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 METTL3Q86U44 580 aaKnown RBP12.29□□□□□ -0.44
CPNE4-201ENST00000429747 KRT78Q8N1N4 520 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 MDGA1Q8NFP4 955 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 OSER1Q9NX31 292 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 Q9Y3F1 56 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 PCDHB14Q9Y5E9 798 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 TARM1B6A8C7 271 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 HHLA1C9JL84 531 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 PCDH7O60245 1069 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 CRHBPP24387 322 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 MAGEA11P43364 429 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 RING1Q06587 406 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 VMACQ2NL98 169 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 MPPE1Q53F39 396 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 PLET1Q6UQ28 207 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 CFAP206Q8IYR0 622 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 GPR150Q8NGU9 434 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 UBE2E3Q969T4 207 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 SACM1LQ9NTJ5 587 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 ZNF624Q9P2J8 865 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-201ENST00000429747 SATB2Q9UPW6 733 aa12.29□□□□□ -0.44
CPNE4-201ENST00000429747 MRPS7Q9Y2R9 242 aaKnown RBP12.29□□□□□ -0.44
CPNE4-201ENST00000429747 KRT87PA6NCN2 255 aa12.28□□□□□ -0.44
CPNE4-201ENST00000429747 PCDH8O95206 1070 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms