RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 NIPAL1Q6NVV3 410 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 LDB1Q86U70 411 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 MR1Q95460 341 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF471Q9BX82 626 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 BCAS3Q9H6U6 928 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 BRD7Q9NPI1 651 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 P2RX2Q9UBL9 471 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 POU2F3Q9UKI9 436 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 RAB21Q9UL25 225 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 BAIAP2Q9UQB8 552 aa8.74□□□□□ -1.01
CTNND1-208ENST00000428599 C14orf166Q9Y224 244 aaKnown RBP8.74□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF670-ZNF695F2Z2N8 137 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 RNF225M0QZC1 329 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 NRP1O14786 923 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 KHNYNO15037 678 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PBX1P40424 430 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 RPS14P62263 151 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 TIGD5Q53EQ6 642 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 CRTC2Q53ET0 693 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PRPF38BQ5VTL8 546 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 C15orf40Q8WUR7 153 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 BORCS5Q969J3 196 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PPP1R14BQ96C90 147 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 FUBP3Q96I24 572 aaKnown RBP eCLIP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 CCM2Q9BSQ5 444 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 SUV39H2Q9H5I1 410 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 B4GALT7Q9UBV7 327 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 RPL26L1Q9UNX3 145 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PEX16Q9Y5Y5 336 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PRAMEF33A0A0G2JMD5 474 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 TTLL8A6PVC2 850 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PRAMEF10O60809 474 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF16P17020 682 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 ECH1Q13011 328 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 SCARB2Q14108 478 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 GPR68Q15743 365 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PRAMEF14Q5SWL7 426 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 LRIF1Q5T3J3 769 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PRAMEF13Q5VWM6 474 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 NOXRED1Q6NXP6 359 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 TNFAIP8L2Q6P589 184 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 SSX6Q7RTT6 188 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 SIAH1Q8IUQ4 282 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 TFAP2BQ92481 460 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 NCSTNQ92542 709 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 ALG3Q92685 438 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 CMTM7Q96FZ5 175 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 EFCAB11Q9BUY7 163 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 SLC6A15Q9H2J7 730 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 WDR55Q9H6Y2 383 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 FBXL12Q9NXK8 326 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 STOX2Q9P2F5 926 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 ERVK-18Q9QC07 812 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 EIF2B4Q9UI10 523 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PLLPQ9Y342 182 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 RPL36Q9Y3U8 105 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 hCG_2039718K7EN88 272 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 CXCR6O00574 342 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 SCGB1D2O95969 90 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 CHRNA1P02708 482 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 HRGP04196 525 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 HCKP08631 526 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 POU2F1P14859 743 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 GJA1P17302 382 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 BDH1Q02338 343 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 KLF10Q13118 480 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 HNRNPDQ14103 355 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 MAD2L1BPQ15013 274 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 GPR33Q49SQ1 333 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 CLEC6AQ6EIG7 209 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF662Q6ZS27 426 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 BEND4Q6ZU67 534 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 VASH1Q7L8A9 365 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 ANKRD46Q86W74 232 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 NXPE1Q8N323 547 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 INO80EQ8NBZ0 244 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 C7orf43Q8WVR3 580 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 IRF7Q92985 503 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PSMG2Q969U7 264 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 TMEM175Q9BSA9 504 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 MARCH7Q9H992 704 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 SMPD3Q9NY59 655 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 GABRQQ9UN88 632 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PLEKHA6Q9Y2H5 1048 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PDYNP01213 254 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 GPIP06744 558 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 HOXB2P14652 356 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 EDNRAP25101 427 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 NFKB2Q00653 900 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 MLC1Q15049 377 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 CTU1Q7Z7A3 348 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 GPAT4Q86UL3 456 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 YIPF7Q8N8F6 280 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 GSTCDQ8NEC7 633 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 ROPN1LQ96C74 230 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 PWWP2AQ96N64 755 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 CMKLR1Q99788 373 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 USB1Q9BQ65 265 aaKnown RBP8.73□□□□□ -1.01
CTNND1-208ENST00000428599 MED11Q9P086 117 aa8.73□□□□□ -1.01
CTNND1-208ENST00000428599 AASSQ9UDR5 926 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms