RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ABCF3Q9NUQ8 709 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 P4HTMQ9NXG6 502 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 LUZP4Q9P127 313 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 STOX2Q9P2F5 926 aaPredicted RBP17.61■□□□□ 0.41
PSPC1-202ENST00000427943 TAC3Q9UHF0 121 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 G3BP2Q9UN86 482 aaKnown RBP17.61■□□□□ 0.41
PSPC1-202ENST00000427943 KLK4Q9Y5K2 254 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 MAU2Q9Y6X3 613 aa17.61■□□□□ 0.41
PSPC1-202ENST00000427943 DOPEY2Q9Y3R5 2298 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 OR2A25A4D2G3 310 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 FITM1A5D6W6 292 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 PEX12O00623 359 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 HAUS5O94927 633 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 MED26O95402 600 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 PGAM1P18669 254 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 OR1D4P47884 311 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 PNLIPRP1P54315 467 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 CRYMQ14894 314 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 SHISA6Q6ZSJ9 500 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 NEK10Q6ZWH5 1172 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 OVCH1Q7RTY7 1134 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 PTERQ96BW5 349 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 IP6K3Q96PC2 410 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 NDNQ99608 321 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 MFRPQ9BY79 579 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 MRPS30Q9NP92 439 aaKnown RBP17.6■□□□□ 0.41
PSPC1-202ENST00000427943 CTSFQ9UBX1 484 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 ZC3H7BQ9UGR2 993 aaKnown RBP17.6■□□□□ 0.41
PSPC1-202ENST00000427943 DHRS7Q9Y394 339 aa17.6■□□□□ 0.41
PSPC1-202ENST00000427943 TTLL8A6PVC2 850 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 SRPX2O60687 465 aaPredicted RBP17.59■□□□□ 0.41
PSPC1-202ENST00000427943 ALOX12BO75342 701 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 VPS26AO75436 327 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 SLC16A8O95907 504 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 MPC1LP0DKB6 136 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 ERVK-10P10266 1014 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 TCP1P17987 556 aaKnown RBP17.59■□□□□ 0.41
PSPC1-202ENST00000427943 ARHGAP19Q14CB8 494 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 NKG7Q16617 165 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 MSS51Q4VC12 460 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 DCAF10Q5QP82 559 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 YOD1Q5VVQ6 348 aaPredicted RBP17.59■□□□□ 0.41
PSPC1-202ENST00000427943 PIWIL4Q7Z3Z4 852 aaKnown RBP17.59■□□□□ 0.41
PSPC1-202ENST00000427943 CLEC1AQ8NC01 280 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 ZNF480Q8WV37 535 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 FER1L6-AS2Q96M78 137 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 SPSB2Q99619 263 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 ZFYVE21Q9BQ24 234 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 AARSD1Q9BTE6 412 aaKnown RBP17.59■□□□□ 0.41
PSPC1-202ENST00000427943 SOX17Q9H6I2 414 aaPredicted RBP17.59■□□□□ 0.41
PSPC1-202ENST00000427943 SYNPO2LQ9H987 977 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 PCDHGB7Q9Y5F8 929 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 HECTD1Q9ULT8 2610 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 PTPN13Q12923 2485 aa17.59■□□□□ 0.41
PSPC1-202ENST00000427943 RELNP78509 3460 aa17.58■□□□□ 0.41
PSPC1-202ENST00000427943 IGKV1-8A0A0C4DH67 115 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 HYKKA2RU49 373 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 DPM1O60762 260 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 PIM1P11309 404 aaPredicted RBP17.58■□□□□ 0.4
PSPC1-202ENST00000427943 ENO3P13929 434 aaPredicted RBP17.58■□□□□ 0.4
PSPC1-202ENST00000427943 NAA25Q14CX7 972 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 FAM214AQ32MH5 1076 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 BBS9Q3SYG4 887 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 ICE2Q659A1 982 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 CYHR1Q6ZMK1 362 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 KLHL7Q8IXQ5 586 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 ASB11Q8WXH4 323 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 INPP5DQ92835 1189 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 SLCO2A1Q92959 643 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 SMAD5Q99717 465 aaKnown RBP17.58■□□□□ 0.4
PSPC1-202ENST00000427943 PLCD4Q9BRC7 762 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 ENAMQ9NRM1 1142 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 KLHL42Q9P2K6 505 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 SLC17A6Q9P2U8 582 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 PCYOX1Q9UHG3 505 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 CDC23Q9UJX2 597 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 COMMD10Q9Y6G5 202 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 COL12A1Q99715 3063 aa17.58■□□□□ 0.4
PSPC1-202ENST00000427943 ZNF839A8K0R7 811 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 E7ENX8 843 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 H0YGG7 62 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 SMAPO00193 183 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 SORBS2O94875 1100 aaKnown RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 ONECUT2O95948 504 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 ALBP02768 609 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 ARF3P61204 181 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 GNG11P61952 73 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 TAP2Q03519 686 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 PRR30Q53SZ7 412 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 SPANXN3Q5MJ09 141 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 HP1BP3Q5SSJ5 553 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 RBM20Q5T481 1227 aaKnown RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 VWA5B1Q5TIE3 1220 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 SLC6A19Q695T7 634 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 JMJD6Q6NYC1 403 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 FBXO42Q6P3S6 717 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 UBE2R2Q712K3 238 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-202ENST00000427943 PAQR7Q86WK9 346 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 IGDCC3Q8IVU1 814 aa17.57■□□□□ 0.4
PSPC1-202ENST00000427943 GALNT16Q8N428 558 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms