RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ADGRF1Q5T601 910 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 INTS11Q5TA45 600 aaKnown RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 CEP68Q76N32 757 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 TMEM150AQ86TG1 271 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 TAGAPQ8N103 731 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 ABHD11Q8NFV4 315 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 RHEBL1Q8TAI7 183 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 ZHX1-C8orf76Q96EF9 292 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 NTN4Q9HB63 628 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 ABCB8Q9NUT2 735 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 IMPAD1Q9NX62 359 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 TAS2R16Q9NYV7 291 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 CAB39Q9Y376 341 aaPredicted RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 CKAP5Q14008 2032 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 ANKRD33BA6NCL7 494 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 TPTEP56180 551 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 RING1Q06587 406 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 ATP13A5Q4VNC0 1218 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 C6orf183Q5T699 404 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 Q6ZVU0 165 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 DSG4Q86SJ6 1040 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 CYP4Z1Q86W10 505 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 MEX3DQ86XN8 651 aaKnown RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 TTC29Q8NA56 475 aaPredicted RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 COPS8Q99627 209 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 PSME2Q9UL46 239 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 VPS9D1Q9Y2B5 631 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 SZT2Q5T011 3432 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 ESR1P03372 595 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 MT-ND2P03891 347 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 HTRA4P83105 476 aaPredicted RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 CACNG1Q06432 222 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 MED22Q15528 200 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 USP39Q53GS9 565 aaKnown RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 RUNDC3AQ59EK9 446 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 LRRC66Q68CR7 880 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 ZNF773Q6PK81 442 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 DLEU7Q6UYE1 221 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 HIPK1Q86Z02 1210 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 RBFAQ8N0V3 343 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 WRAP53Q9BUR4 548 aaKnown RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 REEP1Q9H902 201 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 MAGEE1Q9HCI5 957 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 AASDHPPTQ9NRN7 309 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 C1orf109Q9NX04 203 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 CACNA1IQ9P0X4 2223 aa13□□□□□ -0.33
USP42-203ENST00000426246 A0A1W2PRU2 124 aa13□□□□□ -0.33
USP42-203ENST00000426246 DRGXA6NNA5 263 aa13□□□□□ -0.33
USP42-203ENST00000426246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13□□□□□ -0.33
USP42-203ENST00000426246 CLDN9O95484 217 aa13□□□□□ -0.33
USP42-203ENST00000426246 ACPPP15309 386 aa13□□□□□ -0.33
USP42-203ENST00000426246 KIR3DL1P43629 444 aa13□□□□□ -0.33
USP42-203ENST00000426246 TRPC1P48995 793 aa13□□□□□ -0.33
USP42-203ENST00000426246 TUBA4AP68366 448 aa13□□□□□ -0.33
USP42-203ENST00000426246 RAB33AQ14088 237 aa13□□□□□ -0.33
USP42-203ENST00000426246 BTG3Q14201 252 aaPredicted RBP13□□□□□ -0.33
USP42-203ENST00000426246 CBX2Q14781 532 aaPredicted RBP13□□□□□ -0.33
USP42-203ENST00000426246 Q8N9G6 341 aaPredicted RBP13□□□□□ -0.33
USP42-203ENST00000426246 CYB5D2Q8WUJ1 264 aa13□□□□□ -0.33
USP42-203ENST00000426246 NELL1Q92832 810 aa13□□□□□ -0.33
USP42-203ENST00000426246 CEP19Q96LK0 163 aa13□□□□□ -0.33
USP42-203ENST00000426246 IL4I1Q96RQ9 567 aa13□□□□□ -0.33
USP42-203ENST00000426246 CSF3RQ99062 836 aa13□□□□□ -0.33
USP42-203ENST00000426246 KCNS3Q9BQ31 491 aa13□□□□□ -0.33
USP42-203ENST00000426246 CORO1BQ9BR76 489 aa13□□□□□ -0.33
USP42-203ENST00000426246 ACTL8Q9H568 366 aa13□□□□□ -0.33
USP42-203ENST00000426246 SLC25A37Q9NYZ2 338 aa13□□□□□ -0.33
USP42-203ENST00000426246 DNAJB9Q9UBS3 223 aa13□□□□□ -0.33
USP42-203ENST00000426246 TNPO3Q9Y5L0 923 aaKnown RBP13□□□□□ -0.33
USP42-203ENST00000426246 CLIC1O00299 241 aa13□□□□□ -0.33
USP42-203ENST00000426246 ALPLP05186 524 aa13□□□□□ -0.33
USP42-203ENST00000426246 DCTP40126 519 aa13□□□□□ -0.33
USP42-203ENST00000426246 TUFMP49411 452 aaKnown RBP13□□□□□ -0.33
USP42-203ENST00000426246 PCYT1AP49585 367 aa13□□□□□ -0.33
USP42-203ENST00000426246 HLCSP50747 726 aa13□□□□□ -0.33
USP42-203ENST00000426246 CDH12P55289 794 aa13□□□□□ -0.33
USP42-203ENST00000426246 C5orf22Q49AR2 442 aa13□□□□□ -0.33
USP42-203ENST00000426246 TPGS2Q68CL5 300 aa13□□□□□ -0.33
USP42-203ENST00000426246 OTOP2Q7RTS6 562 aa13□□□□□ -0.33
USP42-203ENST00000426246 CYP2U1Q7Z449 544 aa13□□□□□ -0.33
USP42-203ENST00000426246 VRK3Q8IV63 474 aa13□□□□□ -0.33
USP42-203ENST00000426246 OR8H2Q8N162 312 aa13□□□□□ -0.33
USP42-203ENST00000426246 OVCA2Q8WZ82 227 aa13□□□□□ -0.33
USP42-203ENST00000426246 GTF2H4Q92759 462 aa13□□□□□ -0.33
USP42-203ENST00000426246 IL23AQ9NPF7 189 aa13□□□□□ -0.33
USP42-203ENST00000426246 GNPTGQ9UJJ9 305 aa13□□□□□ -0.33
USP42-203ENST00000426246 RAB23Q9ULC3 237 aa13□□□□□ -0.33
USP42-203ENST00000426246 FUOMA2VDF0 154 aa13□□□□□ -0.33
USP42-203ENST00000426246 A6NL46 340 aa13□□□□□ -0.33
USP42-203ENST00000426246 NEDD8-MDP1E9PL57 170 aa13□□□□□ -0.33
USP42-203ENST00000426246 SLC1A7O00341 560 aa13□□□□□ -0.33
USP42-203ENST00000426246 MANBAO00462 879 aa13□□□□□ -0.33
USP42-203ENST00000426246 EFCAB14O75071 495 aa13□□□□□ -0.33
USP42-203ENST00000426246 TSPAN12O95859 305 aa13□□□□□ -0.33
USP42-203ENST00000426246 BPIP17213 487 aa13□□□□□ -0.33
USP42-203ENST00000426246 LAG3P18627 525 aa13□□□□□ -0.33
USP42-203ENST00000426246 MAPKAPK2P49137 400 aa13□□□□□ -0.33
USP42-203ENST00000426246 RPS26P62854 115 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms