RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 FOXK2Q01167 660 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 FOXM1Q08050 763 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 ZNF844Q08AG5 666 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 TMTC4Q5T4D3 741 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 CDHR3Q6ZTQ4 885 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 LSMEM2Q8N112 164 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 USP7Q93009 1102 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 PMEPA1Q969W9 287 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 TSNARE1Q96NA8 513 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 OR6C1Q96RD1 312 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 TAAR9Q96RI9 348 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 APMAPQ9HDC9 416 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 SLC6A20Q9NP91 592 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 NUDT4Q9NZJ9 180 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 PTBP2Q9UKA9 531 aaKnown RBP23.55■■□□□ 1.36
VEGFA-209ENST00000425836 IGKV1-8A0A0C4DH67 115 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 SUPT3HB4E1H0 165 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 TARM1B6A8C7 271 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 MAP3K7O43318 606 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 SUPT3HO75486 399 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 CCNDBP1O95273 360 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 RBP1P09455 135 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 MLLT3P42568 568 aaPredicted RBP23.54■■□□□ 1.36
VEGFA-209ENST00000425836 ABATP80404 500 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 ACY1Q03154 408 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 LCTLQ6UWM7 567 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 TCAIMQ8N3R3 496 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 SCYL1Q96KG9 808 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 ZIM3Q96PE6 472 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 OR4K3Q96R72 315 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 CTRCQ99895 268 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 TMEM79Q9BSE2 394 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 DPH7Q9BTV6 452 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 ASCL3Q9NQ33 180 aa23.54■■□□□ 1.36
VEGFA-209ENST00000425836 SYCE1LA8MT33 242 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 S100BP04271 92 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-209ENST00000425836 GGT5P36269 586 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 SLC6A12P48065 614 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 CYP4F3Q08477 520 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 GPR19Q15760 415 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 FBXO48Q5FWF7 155 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 LCA5Q86VQ0 697 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 KLHDC8AQ8IYD2 350 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 DNAJC22Q8N4W6 341 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 FGF21Q9NSA1 209 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 WWOXQ9NZC7 414 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 SH2B3Q9UQQ2 575 aa23.53■■□□□ 1.36
VEGFA-209ENST00000425836 CDRT15L2A8MXV6 281 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 C9orf172C9J069 976 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 MAP2K7O14733 419 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 POLR1CO15160 346 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-209ENST00000425836 NRP2O60462 931 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 MSL3P1P0C860 447 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 GDF5P43026 501 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 TUBB3Q13509 450 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 THOC6Q86W42 341 aaKnown RBP23.52■■□□□ 1.36
VEGFA-209ENST00000425836 TMEM151AQ8N4L1 468 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 ESAMQ96AP7 390 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 MRPL57Q9BQC6 102 aaKnown RBP23.52■■□□□ 1.36
VEGFA-209ENST00000425836 HAUS8Q9BT25 410 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 CUEDC1Q9NWM3 386 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-209ENST00000425836 TMEM216Q9P0N5 145 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 XPR1Q9UBH6 696 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 SLC22A14Q9Y267 594 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 PCDHGA3Q9Y5H0 932 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 B3GALT1Q9Y5Z6 326 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 HCRTR1O43613 425 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 GABRA4P48169 554 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 RAB15P59190 212 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 IL11RAQ14626 422 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 NAA25Q14CX7 972 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 KRT71Q3SY84 523 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 DCAF12Q5T6F0 453 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 ZNF501Q96CX3 271 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-209ENST00000425836 PLCD4Q9BRC7 762 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 DDA1Q9BW61 102 aa23.52■■□□□ 1.36
VEGFA-209ENST00000425836 OR2A25A4D2G3 310 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 NVLO15381 856 aaKnown RBP23.51■■□□□ 1.35
VEGFA-209ENST00000425836 KLK8O60259 260 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 GSTA1P08263 222 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 FGF5P12034 268 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 KRT4P19013 534 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 HSPA7P48741 367 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 TMEM164Q5U3C3 297 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 ZNF425Q6IV72 752 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 TRABD2AQ86V40 505 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 PAQR7Q86WK9 346 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 C17orf64Q86WR6 236 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 MDM1Q8TC05 714 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 B3GNT4Q9C0J1 378 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 MRPL46Q9H2W6 279 aaKnown RBP23.51■■□□□ 1.35
VEGFA-209ENST00000425836 CNOT10Q9H9A5 744 aaKnown RBP23.51■■□□□ 1.35
VEGFA-209ENST00000425836 FOXJ2Q9P0K8 574 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 ANKMY1Q9P2S6 941 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 DCDC2Q9UHG0 476 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 SNX7Q9UNH6 387 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 PCDHGA7Q9Y5G6 932 aa23.51■■□□□ 1.35
VEGFA-209ENST00000425836 KIF26BQ2KJY2 2108 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 C1QTNF9BB2RNN3 333 aa23.5■■□□□ 1.35
VEGFA-209ENST00000425836 H7BY64 318 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms