RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 RNLSQ5VYX0 342 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 CD177Q8N6Q3 437 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 SSMEM1Q8WWF3 244 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 FAM218AQ96MZ4 157 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 MGME1Q9BQP7 344 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 CHMP4AQ9BY43 222 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 PANK2Q9BZ23 570 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.46□□□□□ -1.86
LINC01040-201ENST00000425048 PRDM4Q9UKN5 801 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 ZNF148Q9UQR1 794 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 NTNG1Q9Y2I2 539 aa3.46□□□□□ -1.86
LINC01040-201ENST00000425048 UMODL1Q5DID0 1318 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 SRRM4A7MD48 611 aaKnown RBP3.45□□□□□ -1.86
LINC01040-201ENST00000425048 K7EQD1 137 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 KRT33AO76009 404 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 SMIM18P0DKX4 95 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 CHMP24386 653 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 MAMLD1Q13495 774 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 TMEM132DQ14C87 1099 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 SYT14P1Q58G82 188 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 C3P1Q6ZMU1 363 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 RNF130Q86XS8 419 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 FBXO39Q8N4B4 442 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 OR10G7Q8NGN6 311 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 USP6NLQ92738 828 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 C4orf45Q96LM5 186 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 FAM20AQ96MK3 541 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 UBAC1Q9BSL1 405 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 JPT2Q9H910 190 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 PLAGL1Q9UM63 463 aa3.45□□□□□ -1.86
LINC01040-201ENST00000425048 OGTO15294 1046 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 GJA1P17302 382 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 SGCGQ13326 291 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 UGT3A2Q3SY77 523 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 DHRS7BQ6IAN0 325 aaPredicted RBP3.44□□□□□ -1.86
LINC01040-201ENST00000425048 POC5Q8NA72 575 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 OR7A2PQ8NGA2 310 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 EXD1Q8NHP7 514 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 NSMAFQ92636 917 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 TBC1D17Q9HA65 648 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 NAP1L2Q9ULW6 460 aaPredicted RBP3.44□□□□□ -1.86
LINC01040-201ENST00000425048 SELENOKQ9Y6D0 94 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 R4GN57 208 aa3.44□□□□□ -1.86
LINC01040-201ENST00000425048 FAM220BPB1ANY3 271 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 G3V2L1 256 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 FPGTO14772 594 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 ERAL1O75616 437 aaKnown RBP3.43□□□□□ -1.86
LINC01040-201ENST00000425048 GP1BBP13224 206 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 PTPN3P26045 913 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 ELAVL4P26378 380 aaKnown RBP3.43□□□□□ -1.86
LINC01040-201ENST00000425048 OR3A2P47893 321 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 MFAP4P55083 255 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 MAT1AQ00266 395 aaKnown RBP3.43□□□□□ -1.86
LINC01040-201ENST00000425048 ZNF146Q15072 292 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 GARNL3Q5VVW2 1013 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 AACSQ86V21 672 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 ADGRF2Q8IZF7 708 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 RTL3Q8N8U3 475 aaKnown RBP3.43□□□□□ -1.86
LINC01040-201ENST00000425048 CSNK1G2-AS1Q8NCQ2 148 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 IL17REQ8NFR9 667 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 C2orf48Q96LS8 159 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 ITPAQ9BY32 194 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 BAIAP2L1Q9UHR4 511 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 PLCL2Q9UPR0 1127 aa3.43□□□□□ -1.86
LINC01040-201ENST00000425048 LY6G6DO95868 133 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 THY1P04216 161 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 DNA2P51530 1060 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 KLC1Q07866 573 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 G3BP1Q13283 466 aaKnown RBP eCLIP3.42□□□□□ -1.86
LINC01040-201ENST00000425048 TMEM95Q3KNT9 176 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 REG3GQ6UW15 175 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 TMPRSS11BQ86T26 416 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 TMEM173Q86WV6 379 aaPredicted RBP3.42□□□□□ -1.86
LINC01040-201ENST00000425048 LGI2Q8N0V4 545 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 C11orf42Q8N5U0 333 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 C1orf131Q8NDD1 294 aaKnown RBP3.42□□□□□ -1.86
LINC01040-201ENST00000425048 THOC1Q96FV9 657 aaKnown RBP3.42□□□□□ -1.86
LINC01040-201ENST00000425048 SLC26A6Q9BXS9 759 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 FTOQ9C0B1 505 aaKnown RBP eCLIP3.42□□□□□ -1.86
LINC01040-201ENST00000425048 TLE6Q9H808 572 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 Q9N2K0 584 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 ZNF581Q9P0T4 197 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 ORC3Q9UBD5 711 aaPredicted RBP3.42□□□□□ -1.86
LINC01040-201ENST00000425048 SEC63Q9UGP8 760 aaKnown RBP3.42□□□□□ -1.86
LINC01040-201ENST00000425048 PGAP2Q9UHJ9 254 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 IKZF3Q9UKT9 509 aa3.42□□□□□ -1.86
LINC01040-201ENST00000425048 TMEM221A6NGB7 291 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 H0Y9J4 135 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 O00370 1275 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 TRAFD1O14545 582 aaPredicted RBP3.41□□□□□ -1.86
LINC01040-201ENST00000425048 ARPC2O15144 300 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 SH3BGRLO75368 114 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 NXPH4O95158 308 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 AGR2O95994 175 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 KRT6AP02538 564 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 KRT6BP04259 564 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 PCP11498 1178 aaKnown RBP3.41□□□□□ -1.86
LINC01040-201ENST00000425048 ATP6V1B1P15313 513 aa3.41□□□□□ -1.86
LINC01040-201ENST00000425048 AOC1P19801 751 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms