RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CCND1P24385 295 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 CMPK1P30085 196 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 RPA3P35244 121 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-205ENST00000423941 NAE1Q13564 534 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 MAP7Q14244 749 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 CSHL1Q14406 222 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 NAA25Q14CX7 972 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 RASA2Q15283 850 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 TGFBIQ15582 683 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 OR4D1Q15615 310 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 PWWP2BQ6NUJ5 590 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 FBXO42Q6P3S6 717 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 TIPARPQ7Z3E1 657 aaKnown RBP17.74■□□□□ 0.43
HDAC6-205ENST00000423941 PCBD2Q9H0N5 130 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 NMRAL1Q9HBL8 299 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 CCDC177Q9NQR7 707 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-205ENST00000423941 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.74■□□□□ 0.43
HDAC6-205ENST00000423941 TAC3Q9UHF0 121 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 IKBKGQ9Y6K9 419 aa17.74■□□□□ 0.43
HDAC6-205ENST00000423941 V9GYY5 206 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-205ENST00000423941 MDC1Q14676 2089 aaKnown RBP17.74■□□□□ 0.43
HDAC6-205ENST00000423941 CELSR3Q9NYQ7 3312 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 A0A096LPK6 155 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 STMND1H3BQB6 276 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 CTSVO60911 334 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 STK17BO94768 372 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 SNRPAP09012 282 aaKnown RBP17.73■□□□□ 0.43
HDAC6-205ENST00000423941 TYK2P29597 1187 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 GGT5P36269 586 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 GCGRP47871 477 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 HNMTP50135 292 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 TBPL1P62380 186 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 CLN3Q13286 438 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 EMBQ6PCB8 327 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 LCTLQ6UWM7 567 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 RAPH1Q70E73 1250 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 TAOK1Q7L7X3 1001 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 TBC1D1Q86TI0 1168 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-205ENST00000423941 PAQR7Q86WK9 346 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 OR1L3Q8NH93 324 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 CAVIN3Q969G5 261 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 NKD1Q969G9 470 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 RHBDF1Q96CC6 855 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 NXNL1Q96CM4 212 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 OR4K3Q96R72 315 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 ATOH8Q96SQ7 321 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 PLCD4Q9BRC7 762 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 DPH7Q9BTV6 452 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 ACAT2Q9BWD1 397 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 ATG10Q9H0Y0 220 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 MRPS30Q9NP92 439 aaKnown RBP17.73■□□□□ 0.43
HDAC6-205ENST00000423941 UTP6Q9NYH9 597 aaKnown RBP17.73■□□□□ 0.43
HDAC6-205ENST00000423941 EURLQ9NYK6 297 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 SERTAD3Q9UJW9 196 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 PLCL2Q9UPR0 1127 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 PCDHB3Q9Y5E6 796 aa17.73■□□□□ 0.43
HDAC6-205ENST00000423941 ANKRD11Q6UB99 2663 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-205ENST00000423941 USP24Q9UPU5 2620 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 RFPL1O75677 317 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 KRT37O76014 449 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 KLHL2O95198 593 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 CCNDBP1O95273 360 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 GUCA1CO95843 209 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 SHBGP04278 402 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 TUBBP07437 444 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 ANXA5P08758 320 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 COL6A2P12110 1019 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 HRH2P25021 359 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 HSD17B3P37058 310 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 IRF9Q00978 393 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 RNF44Q7L0R7 432 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 TDRPQ86YL5 185 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 GPSM1Q86YR5 675 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 MCATQ8IVS2 390 aaKnown RBP17.72■□□□□ 0.43
HDAC6-205ENST00000423941 RHEBL1Q8TAI7 183 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 STAG3L4Q8TBR4 150 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 MZB1Q8WU39 189 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 KCTD4Q8WVF5 259 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 MTBPQ96DY7 904 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 UNKQ9C0B0 810 aaKnown RBP17.72■□□□□ 0.43
HDAC6-205ENST00000423941 PPCSQ9HAB8 311 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 TLK1Q9UKI8 766 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 SNX7Q9UNH6 387 aa17.72■□□□□ 0.43
HDAC6-205ENST00000423941 TMEM150CB9EJG8 249 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 TRIM49D1C9J1S8 452 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 TAPBPO15533 448 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 SRPX2O60687 465 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-205ENST00000423941 CTSBP07858 339 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 MTHFD2P13995 350 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 TFEBP19484 476 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 SLC6A12P48065 614 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 ACAP2Q15057 778 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 TGIF1Q15583 401 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 ST3GAL2Q16842 350 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 FAM83EQ2M2I3 478 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 PTCHD3Q3KNS1 767 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 ZC3H12BQ5HYM0 836 aaKnown RBP17.71■□□□□ 0.43
HDAC6-205ENST00000423941 LGSNQ5TDP6 509 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 PRAMEF13Q5VWM6 474 aa17.71■□□□□ 0.43
HDAC6-205ENST00000423941 CAPN13Q6MZZ7 669 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms