RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 MAD1L1Q9Y6D9 718 aa14.55□□□□□ -0.08
USB1-202ENST00000423271 A0A0J9YVX5 310 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 MAGEB16A2A368 324 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 CTAGE15A4D2H0 777 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 SMAPO00193 183 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 DSCR3O14972 297 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 PSIP1O75475 530 aaKnown RBP14.54□□□□□ -0.08
USB1-202ENST00000423271 USP1O94782 785 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 FKBP9O95302 570 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 MED26O95402 600 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 CTAGE8P0CG41 777 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 ERGP11308 486 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 RRADP55042 308 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 VSX2P58304 361 aaPredicted RBP14.54□□□□□ -0.08
USB1-202ENST00000423271 MPP1Q00013 466 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 SLC7A5Q01650 507 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 DHX9Q08211 1270 aaKnown RBP14.54□□□□□ -0.08
USB1-202ENST00000423271 THOC5Q13769 683 aaKnown RBP14.54□□□□□ -0.08
USB1-202ENST00000423271 SSPNQ14714 243 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 BBS9Q3SYG4 887 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 SUSD1Q6UWL2 747 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 CTAGE6Q86UF2 777 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 CTAGE4Q8IX94 777 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 MMGT1Q8N4V1 131 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 NOA1Q8NC60 698 aaKnown RBP14.54□□□□□ -0.08
USB1-202ENST00000423271 OR9A1PQ8NGU1 263 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 MAGEC3Q8TD91 643 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 ZUFSPQ96AP4 578 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 LRRC1Q9BTT6 524 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 SLC6A20Q9NP91 592 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 C20orf96Q9NUD7 363 aaPredicted RBP14.54□□□□□ -0.08
USB1-202ENST00000423271 GPR83Q9NYM4 423 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 GRHL1Q9NZI5 618 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 LUZP4Q9P127 313 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 VPS9D1Q9Y2B5 631 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 ZNF451Q9Y4E5 1061 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 KLK4Q9Y5K2 254 aa14.54□□□□□ -0.08
USB1-202ENST00000423271 USP9XQ93008 2570 aaPredicted RBP14.54□□□□□ -0.08
USB1-202ENST00000423271 PRRC2CQ9Y520 2896 aaKnown RBP14.53□□□□□ -0.08
USB1-202ENST00000423271 HEATR5BQ9P2D3 2071 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 PCM1Q15154 2024 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 NUP210LQ5VU65 1888 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 LOC105369274A0A096LPK9 316 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 LOC102723532A0A0G2JNH3 316 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 FITM1A5D6W6 292 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 TARM1B6A8C7 271 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 MYO1CO00159 1063 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 NDC80O14777 642 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 ARSFP54793 590 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 CALCOCO2Q13137 446 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 GRM7Q14831 915 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 TRADDQ15628 312 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 LONRF1Q17RB8 773 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 TCTE1Q5JU00 501 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 RNF44Q7L0R7 432 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 OR4N4Q8N0Y3 316 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 PDIK1LQ8N165 341 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 TTC29Q8NA56 475 aaPredicted RBP14.53□□□□□ -0.08
USB1-202ENST00000423271 BBOF1Q8ND07 529 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 PTERQ96BW5 349 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 PKP4Q99569 1192 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 MFRPQ9BY79 579 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 RAB17Q9H0T7 212 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 SYNPO2LQ9H987 977 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 ENAMQ9NRM1 1142 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 P4HTMQ9NXG6 502 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 WHRNQ9P202 907 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 STOX2Q9P2F5 926 aaPredicted RBP14.53□□□□□ -0.08
USB1-202ENST00000423271 CTSFQ9UBX1 484 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 UTP11Q9Y3A2 253 aaKnown RBP14.53□□□□□ -0.08
USB1-202ENST00000423271 FAM169AQ9Y6X4 670 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 SHANK1Q9Y566 2161 aa14.53□□□□□ -0.08
USB1-202ENST00000423271 OR2A25A4D2G3 310 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 TTLL8A6PVC2 850 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 CYSRT1A8MQ03 144 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 SORBS2O94875 1100 aaKnown RBP14.52□□□□□ -0.09
USB1-202ENST00000423271 ONECUT2O95948 504 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 CATP04040 527 aaKnown RBP14.52□□□□□ -0.09
USB1-202ENST00000423271 CD63P08962 238 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 PGAM1P18669 254 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 CMPK1P30085 196 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 OR1D4P47884 311 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 CD97P48960 835 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 ARL4CP56559 192 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 TSTA3Q13630 321 aaPredicted RBP14.52□□□□□ -0.09
USB1-202ENST00000423271 NKG7Q16617 165 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 HIF1AQ16665 826 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 TTLL9Q3SXZ7 439 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 PRR30Q53SZ7 412 aaPredicted RBP14.52□□□□□ -0.09
USB1-202ENST00000423271 HSP90AA5PQ58FG0 334 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 DCAF10Q5QP82 559 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 WASHC2DQ5SRD0 308 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 HP1BP3Q5SSJ5 553 aaPredicted RBP14.52□□□□□ -0.09
USB1-202ENST00000423271 SHISA6Q6ZSJ9 500 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 OVCH1Q7RTY7 1134 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 IGDCC3Q8IVU1 814 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 RBMXL3Q8N7X1 1067 aaKnown RBP14.52□□□□□ -0.09
USB1-202ENST00000423271 CEP112Q8N8E3 955 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 PPFIBP2Q8ND30 876 aa14.52□□□□□ -0.09
USB1-202ENST00000423271 SMPDL3AQ92484 453 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms