RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 IL10RAQ13651 578 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 RBM20Q5T481 1227 aaKnown RBP21.01■□□□□ 0.95
TRAF4-204ENST00000422344 TEDDM1Q5T9Z0 273 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 MLIPQ5VWP3 458 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 STEAP4Q687X5 459 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 SUSD1Q6UWL2 747 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 MYO1HQ8N1T3 1032 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 GPATCH11Q8N954 259 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 TTC29Q8NA56 475 aaPredicted RBP21.01■□□□□ 0.95
TRAF4-204ENST00000422344 FBXO36Q8NEA4 188 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 ERP44Q9BS26 406 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 DHRS4Q9BTZ2 278 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 DPH5Q9H2P9 285 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 MRPS30Q9NP92 439 aaKnown RBP21.01■□□□□ 0.95
TRAF4-204ENST00000422344 ZFATQ9P243 1243 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 IFT80Q9P2H3 777 aaPredicted RBP21.01■□□□□ 0.95
TRAF4-204ENST00000422344 SLC17A6Q9P2U8 582 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 NDOR1Q9UHB4 597 aa21.01■□□□□ 0.95
TRAF4-204ENST00000422344 SNRNP200O75643 2136 aaKnown RBP21.01■□□□□ 0.95
TRAF4-204ENST00000422344 GFYI3L273 518 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 RFPL1O75677 317 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 SLC16A8O95907 504 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 CD63P08962 238 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 ALAS2P22557 587 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 GABRB3P28472 473 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 PMS2P54278 862 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 PDAP1Q13442 181 aaKnown RBP21■□□□□ 0.95
TRAF4-204ENST00000422344 GRM7Q14831 915 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 ZNF385CQ66K41 422 aaPredicted RBP21■□□□□ 0.95
TRAF4-204ENST00000422344 TRMT10BQ6PF06 316 aaKnown RBP21■□□□□ 0.95
TRAF4-204ENST00000422344 CYHR1Q6ZMK1 362 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 EEF1AKMT1Q8WVE0 214 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 GBP5Q96PP8 586 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 WDR83Q9BRX9 315 aaKnown RBP21■□□□□ 0.95
TRAF4-204ENST00000422344 DPH7Q9BTV6 452 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 PLAC1Q9HBJ0 212 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 ABCF3Q9NUQ8 709 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 UTP6Q9NYH9 597 aaKnown RBP21■□□□□ 0.95
TRAF4-204ENST00000422344 TAC3Q9UHF0 121 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 ANAPC2Q9UJX6 822 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 CORO1CQ9ULV4 474 aaPredicted RBP21■□□□□ 0.95
TRAF4-204ENST00000422344 KLK4Q9Y5K2 254 aa21■□□□□ 0.95
TRAF4-204ENST00000422344 SPTBP11277 2137 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 PABPN1LA6NDY0 278 aaKnown RBP20.99■□□□□ 0.95
TRAF4-204ENST00000422344 MKRN2OSH3BPM6 223 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 RAD51CO43502 376 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 SRPX2O60687 465 aaPredicted RBP20.99■□□□□ 0.95
TRAF4-204ENST00000422344 C8GP07360 202 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 CAPN1P07384 714 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 CDKN2DP55273 166 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 VSX2P58304 361 aaPredicted RBP20.99■□□□□ 0.95
TRAF4-204ENST00000422344 FOXK1P85037 733 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 MGAT5Q09328 741 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 FRG1Q14331 258 aaKnown RBP20.99■□□□□ 0.95
TRAF4-204ENST00000422344 THEMIS2Q5TEJ8 643 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 YOD1Q5VVQ6 348 aaPredicted RBP20.99■□□□□ 0.95
TRAF4-204ENST00000422344 PAQR3Q6TCH7 311 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 TTLL10Q6ZVT0 673 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 SPNS2Q8IVW8 549 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 ZBED8Q8IZ13 594 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 PPFIBP2Q8ND30 876 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 MCOLN3Q8TDD5 553 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 ZNF480Q8WV37 535 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 LINGO1Q96FE5 620 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 ABHD17AQ96GS6 310 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 WHRNQ9P202 907 aa20.99■□□□□ 0.95
TRAF4-204ENST00000422344 A0A0J9YVX5 310 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 A0A1B0GX78 115 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 E7ESA3 106 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 CTSVO60911 334 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 SLC9A5Q14940 896 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 FASTKD3Q14CZ7 662 aaKnown RBP20.98■□□□□ 0.95
TRAF4-204ENST00000422344 NKAIN1Q4KMZ8 207 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 ICE2Q659A1 982 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 FAM45BPQ6NSW5 357 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 RAB43Q86YS6 212 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 FAM45AQ8TCE6 357 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 SLC6A20Q9NP91 592 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 CUTCQ9NTM9 273 aa20.98■□□□□ 0.95
TRAF4-204ENST00000422344 UTP11Q9Y3A2 253 aaKnown RBP20.98■□□□□ 0.95
TRAF4-204ENST00000422344 USP9YO00507 2555 aaPredicted RBP20.98■□□□□ 0.95
TRAF4-204ENST00000422344 ARGFXA6NJG6 315 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 E7ENX8 843 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 TP73O15350 636 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 EIF2S1P05198 315 aaKnown RBP20.97■□□□□ 0.95
TRAF4-204ENST00000422344 PIM1P11309 404 aaPredicted RBP20.97■□□□□ 0.95
TRAF4-204ENST00000422344 FOLR3P41439 243 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 IL2P60568 153 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 ABATP80404 500 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 TAP2Q03519 686 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 PRDX1Q06830 199 aaKnown RBP20.97■□□□□ 0.95
TRAF4-204ENST00000422344 CKAP4Q07065 602 aaKnown RBP20.97■□□□□ 0.95
TRAF4-204ENST00000422344 SP140Q13342 867 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 FAM214AQ32MH5 1076 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 WASHC2DQ5SRD0 308 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 HECTD2Q5U5R9 776 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 FAM69BQ5VUD6 431 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 RNF44Q7L0R7 432 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 ADCK2Q7Z695 626 aa20.97■□□□□ 0.95
TRAF4-204ENST00000422344 APLFQ8IW19 511 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms