RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 TRIT1Q9H3H1 467 aaKnown RBP18.25■□□□□ 0.51
RBFOX1-204ENST00000422070 VPS29Q9UBQ0 182 aa18.25■□□□□ 0.51
RBFOX1-204ENST00000422070 C15orf41Q9Y2V0 281 aa18.25■□□□□ 0.51
RBFOX1-204ENST00000422070 PCDHA9Q9Y5H5 950 aa18.25■□□□□ 0.51
RBFOX1-204ENST00000422070 SPTBN5Q9NRC6 3674 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 NME4O00746 187 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 MAN2B1O00754 1011 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 NARSO43776 548 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 PRMT3O60678 531 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 IGLV3-19P01714 112 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 ASGR2P07307 311 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 GABRG2P18507 467 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 TPMTP51580 245 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 MED27Q6P2C8 311 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 TMPRSS11BQ86T26 416 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 RNF148Q8N7C7 305 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 OR7G3Q8NG95 312 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 DNAJB8Q8NHS0 232 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 SLC5A11Q8WWX8 675 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 TESCQ96BS2 214 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 SLC45A3Q96JT2 553 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 HHIPQ96QV1 700 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 MUC13Q9H3R2 512 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 SGK2Q9HBY8 427 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 USP36Q9P275 1121 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 CIDEBQ9UHD4 219 aa18.24■□□□□ 0.51
RBFOX1-204ENST00000422070 LRRC72A6NJI9 287 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 H3BNX3 289 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 FOXE1O00358 373 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 C1GALT1C1LP0DN25 315 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 C21orf58P58505 322 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 BNIP2Q12982 314 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 TDGQ13569 410 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 PRAMEF14Q5SWL7 426 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 PRAMEF13Q5VWM6 474 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 KIAA1324Q6UXG2 1013 aaKnown RBP18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 CHST15Q7LFX5 561 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 BHLHE22Q8NFJ8 381 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 SLC13A3Q8WWT9 602 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 PYDC1Q8WXC3 89 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 TMEM125Q96AQ2 219 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 APIPQ96GX9 242 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 PCBD2Q9H0N5 130 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 PPT2Q9UMR5 302 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 DLGAP4Q9Y2H0 992 aa18.23■□□□□ 0.51
RBFOX1-204ENST00000422070 TCRBV21S2A2A0A5A6 115 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 SLC31A1O15431 190 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 LATO43561 262 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 DNAJA2O60884 412 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 C8BP07358 591 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 ACP5P13686 325 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 SDC1P18827 310 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 MAT2AP31153 395 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 CLCNKAP51800 687 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 C6orf10Q5SRN2 563 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 NXPE4Q6UWF7 544 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 MSANTD1Q6ZTZ1 278 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 DHDDSQ86SQ9 333 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 UBE2E3Q969T4 207 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 DUS3LQ96G46 650 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 CMTM6Q9NX76 183 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 SIRT5Q9NXA8 310 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 SUFUQ9UMX1 484 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 PSMD13Q9UNM6 376 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 RUVBL1Q9Y265 456 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 TOR1BO14657 336 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 FPGTO14772 594 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 PGRP06401 933 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 HNRNPA2B1P22626 353 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 ACSL1P33121 698 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 HNRNPFP52597 415 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 EEFSECP57772 596 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 PWP1Q13610 501 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 DPY19L1Q2PZI1 675 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 HABP4Q5JVS0 413 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 IRAK1BP1Q5VVH5 260 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 NOXRED1Q6NXP6 359 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 SLC2A7Q6PXP3 512 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 DLEU7Q6UYE1 221 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 HID1Q8IV36 788 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 KIAA2013Q8IYS2 634 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 RAB42Q8N4Z0 105 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 GOLM1Q8NBJ4 401 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 NRG4Q8WWG1 115 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 RAB11FIP5Q9BXF6 653 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 IL1RL2Q9HB29 575 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 FZD3Q9NPG1 666 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 GEMIN8Q9NWZ8 242 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 LRRC42Q9Y546 428 aa18.22■□□□□ 0.51
RBFOX1-204ENST00000422070 ATG2BQ96BY7 2078 aa18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 PIPSLA2A3N6 862 aa18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 SESN3P58005 492 aa18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 CAPRIN1Q14444 709 aaKnown RBP18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 SLBPQ14493 270 aaKnown RBP eCLIP18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 NFATC4Q14934 902 aa18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 FXNQ16595 210 aa18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 HIST2H2ACQ16777 129 aaPredicted RBP18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 FAM174BQ3ZCQ3 159 aa18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 SPIN4Q56A73 249 aa18.21■□□□□ 0.51
RBFOX1-204ENST00000422070 CMPK2Q5EBM0 449 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms