RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PTERQ96BW5 349 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 FOPNLQ96NB1 174 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 IP6K3Q96PC2 410 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 PKP4Q99569 1192 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 SELENOSQ9BQE4 189 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 MESP1Q9BRJ9 268 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 WDR54Q9H977 334 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 GRPEL1Q9HAV7 217 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 PLAC1Q9HBJ0 212 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 P4HTMQ9NXG6 502 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 GPR83Q9NYM4 423 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 SAMD15Q9P1V8 674 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 KLHL42Q9P2K6 505 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 NDOR1Q9UHB4 597 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 GPN3Q9UHW5 284 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-206ENST00000420121 ZNF451Q9Y4E5 1061 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 FAM169AQ9Y6X4 670 aa10.56□□□□□ -0.72
SSBP3-206ENST00000420121 ESPL1Q14674 2120 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 CNTRLQ7Z7A1 2325 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 A0A0J9YVX5 310 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 VSTM2BA6NLU5 285 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 E7ENX8 843 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 GFYI3L273 518 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 SOCS6O14544 535 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 PFDN6O15212 129 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 NRDCO43847 1150 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 SRPX2O60687 465 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 BANF1O75531 89 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 HAUS5O94927 633 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 ALBP02768 609 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 CD63P08962 238 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 ALAS2P22557 587 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 GABRB3P28472 473 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 OR1D4P47884 311 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 UQCRFS1P47985 274 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 VSX2P58304 361 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 SNRPNP63162 240 aaKnown RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 TAP2Q03519 686 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 RAPSNQ13702 412 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 GRM7Q14831 915 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 LONRF1Q17RB8 773 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 PRTGQ2VWP7 1150 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 MSS51Q4VC12 460 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 WASHC2DQ5SRD0 308 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 SLC6A19Q695T7 634 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 ZNF425Q6IV72 752 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 JMJD6Q6NYC1 403 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 PAQR7Q86WK9 346 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 PPIL6Q8IXY8 311 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 ARHGEF39Q8N4T4 335 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 METTL27Q8N6F8 245 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 PPFIBP2Q8ND30 876 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 MAGEC3Q8TD91 643 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 ASB11Q8WXH4 323 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 SLCO2A1Q92959 643 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 C10orf90Q96M02 699 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 NAP1L3Q99457 506 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 GPR21Q99679 349 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 DPH7Q9BTV6 452 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 ACAT2Q9BWD1 397 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 DDX47Q9H0S4 455 aaKnown RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 ZNF552Q9H707 407 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 IRAK4Q9NWZ3 460 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 STOX2Q9P2F5 926 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-206ENST00000420121 CTSFQ9UBX1 484 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 FBXO5Q9UKT4 447 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 DHRS7Q9Y394 339 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 MAP4K5Q9Y4K4 846 aa10.55□□□□□ -0.72
SSBP3-206ENST00000420121 NBPF19A0A087WUL8 3843 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 CTAGE9A4FU28 777 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 USP27XA6NNY8 438 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 E5RI56 91 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 AGPSO00116 658 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 DNALI1O14645 258 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 DPM1O60762 260 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 ALOX12BO75342 701 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 SLC16A8O95907 504 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 MPC1LP0DKB6 136 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 MMP11P24347 488 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 CMPK1P30085 196 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 SKIV2L2P42285 1042 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 PNLIPRP1P54315 467 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 THOC5Q13769 683 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 PTK6Q13882 451 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 UBAP2LQ14157 1087 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 CRYMQ14894 314 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 MYBPC3Q14896 1274 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 ARHGAP19Q14CB8 494 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 HSP90AA5PQ58FG0 334 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 PIWIL4Q7Z3Z4 852 aaKnown RBP10.54□□□□□ -0.72
SSBP3-206ENST00000420121 IGDCC3Q8IVU1 814 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 LMNTD2Q8IXW0 634 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 CPAMD8Q8IZJ3 1885 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 GALNT16Q8N428 558 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 RAB42Q8N4Z0 105 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 CPT1CQ8TCG5 803 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 SMPDL3AQ92484 453 aa10.54□□□□□ -0.72
SSBP3-206ENST00000420121 ZFYVE21Q9BQ24 234 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms