RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 OR2T34Q8NGX1 318 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PYDC1Q8WXC3 89 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 LRCH3Q96II8 777 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 BTBD1Q9H0C5 482 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PACSIN3Q9UKS6 424 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 RUVBL1Q9Y265 456 aaKnown RBP16.24■□□□□ 0.19
SSBP3-205ENST00000417664 LRRC42Q9Y546 428 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PCDHA9Q9Y5H5 950 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 FOXE1O00358 373 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-205ENST00000417664 MAP3K7O43318 606 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 SESN3P58005 492 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PTGR1Q14914 329 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 DPY19L1Q2PZI1 675 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PYCR3Q53H96 274 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 HABP4Q5JVS0 413 aaKnown RBP16.24■□□□□ 0.19
SSBP3-205ENST00000417664 SUSD1Q6UWL2 747 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 KIAA1324Q6UXG2 1013 aaKnown RBP16.24■□□□□ 0.19
SSBP3-205ENST00000417664 TMEM92Q6UXU6 159 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 CHST15Q7LFX5 561 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-205ENST00000417664 DHDDSQ86SQ9 333 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 TMPRSS11BQ86T26 416 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 TMEM126BQ8IUX1 230 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 LAS2Q8IYD9 372 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 BHLHE22Q8NFJ8 381 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-205ENST00000417664 OR5AR1Q8NGP9 310 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 SLC13A3Q8WWT9 602 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 SLC5A11Q8WWX8 675 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 STARD8Q92502 1023 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 TESCQ96BS2 214 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 SLC39A3Q9BRY0 314 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 VCX3BQ9H321 246 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 IL1RL2Q9HB29 575 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 TM7SF3Q9NS93 570 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 C6orf203Q9P0P8 240 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PSMD13Q9UNM6 376 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 AP3M1Q9Y2T2 418 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PRR19A6NJB7 356 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 NME4O00746 187 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 TOR1BO14657 336 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 FPGTO14772 594 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 MYO1DO94832 1006 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 BAG2O95816 211 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 PGRP06401 933 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 TCN1P20061 433 aaPredicted RBP16.23■□□□□ 0.19
SSBP3-205ENST00000417664 IDSP22304 550 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 TPMTP51580 245 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 CLCNKAP51800 687 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 EEFSECP57772 596 aaKnown RBP16.23■□□□□ 0.19
SSBP3-205ENST00000417664 TDGQ13569 410 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 PWP1Q13610 501 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 PRAMEF14Q5SWL7 426 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 PRAMEF13Q5VWM6 474 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 NOXRED1Q6NXP6 359 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 NXPE4Q6UWF7 544 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 MSANTD1Q6ZTZ1 278 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 GOLM1Q8NBJ4 401 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 HIPK4Q8NE63 616 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 ZUFSPQ96AP4 578 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 TMEM125Q96AQ2 219 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 RAB11FIP5Q9BXF6 653 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 TRIM15Q9C019 465 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 CIDEBQ9UHD4 219 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 PPT2Q9UMR5 302 aa16.23■□□□□ 0.19
SSBP3-205ENST00000417664 XIRP2A4UGR9 3374 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 TCRBV21S2A2A0A5A6 115 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 SHISA7A6NL88 538 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 NVLO15381 856 aaKnown RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 SLC31A1O15431 190 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 KCNH1O95259 989 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 C8BP07358 591 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 ACP5P13686 325 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 PRPS1L1P21108 318 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 HNRNPA2B1P22626 353 aaKnown RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 MAT2AP31153 395 aaKnown RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 C21orf58P58505 322 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 PPP2CBP62714 309 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 PPP2CAP67775 309 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 PHEXP78562 749 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 ACSM2AQ08AH3 577 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 SMAD2Q15796 467 aaKnown RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 MAPKAPK3Q16644 382 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 FAM174BQ3ZCQ3 159 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 SPIN4Q56A73 249 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 CMPK2Q5EBM0 449 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 SWT1Q5T5J6 900 aaKnown RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 THEMIS2Q5TEJ8 643 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 IRAK1BP1Q5VVH5 260 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 ACSM2BQ68CK6 577 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 SMPDL3AQ92484 453 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 C11orf24Q96F05 449 aaPredicted RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 DUS3LQ96G46 650 aaKnown RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 APIPQ96GX9 242 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 TACO1Q9BSH4 297 aaKnown RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 PITHD1Q9GZP4 211 aaPredicted RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 POLMQ9NP87 494 aaPredicted RBP16.22■□□□□ 0.19
SSBP3-205ENST00000417664 CMTM6Q9NX76 183 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 SIRT5Q9NXA8 310 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 ADGRE2Q9UHX3 823 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 SUFUQ9UMX1 484 aa16.22■□□□□ 0.19
SSBP3-205ENST00000417664 DLGAP4Q9Y2H0 992 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms