RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ISL2Q96A47 359 aa12□□□□□ -0.49
SKA1-203ENST00000417656 TCTN2Q96GX1 697 aa12□□□□□ -0.49
SKA1-203ENST00000417656 EGFL8Q99944 293 aa12□□□□□ -0.49
SKA1-203ENST00000417656 ZPBPQ9BS86 351 aa12□□□□□ -0.49
SKA1-203ENST00000417656 ULBP3Q9BZM4 244 aa12□□□□□ -0.49
SKA1-203ENST00000417656 VPS11Q9H270 941 aa12□□□□□ -0.49
SKA1-203ENST00000417656 MRPS30Q9NP92 439 aaKnown RBP12□□□□□ -0.49
SKA1-203ENST00000417656 IGSF5Q9NSI5 407 aa12□□□□□ -0.49
SKA1-203ENST00000417656 SH2B3Q9UQQ2 575 aa12□□□□□ -0.49
SKA1-203ENST00000417656 ACACAQ13085 2346 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 IGKV1-8A0A0C4DH67 115 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 TEX51A0A1B0GUA7 166 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 NCF1BA6NI72 391 aaPredicted RBP11.99□□□□□ -0.49
SKA1-203ENST00000417656 NCF1CA8MVU1 366 aaPredicted RBP11.99□□□□□ -0.49
SKA1-203ENST00000417656 STMND1H3BQB6 276 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 STK17BO94768 372 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 KIAA0754O94854 1291 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 CCNDBP1O95273 360 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 DLGAP3O95886 979 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 SHBGP04278 402 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 LIPCP11150 499 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 NCF1P14598 390 aaPredicted RBP11.99□□□□□ -0.49
SKA1-203ENST00000417656 TFEBP19484 476 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 CNTFP26441 200 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 CD82P27701 267 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 HSD17B3P37058 310 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 EIF2S3P41091 472 aaKnown RBP11.99□□□□□ -0.49
SKA1-203ENST00000417656 CDKL1Q00532 357 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 CLN3Q13286 438 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 TGIF1Q15583 401 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
SKA1-203ENST00000417656 PRAMEF17Q5VTA0 474 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 PWWP2BQ6NUJ5 590 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 TMEM126BQ8IUX1 230 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 DNAJC22Q8N4W6 341 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 OR56A3Q8NH54 315 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 ATL1Q8WXF7 558 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 N4BP2L2Q92802 583 aaPredicted RBP11.99□□□□□ -0.49
SKA1-203ENST00000417656 PYCR2Q96C36 320 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 NXNL1Q96CM4 212 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 DPH7Q9BTV6 452 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 SGPP1Q9BX95 441 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 PARD6BQ9BYG5 372 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 CHRNA10Q9GZZ6 450 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 ALG9Q9H6U8 611 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 WDR70Q9NW82 654 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 CUEDC1Q9NWM3 386 aaPredicted RBP11.99□□□□□ -0.49
SKA1-203ENST00000417656 PSMC3IPQ9P2W1 217 aaPredicted RBP11.99□□□□□ -0.49
SKA1-203ENST00000417656 TLK1Q9UKI8 766 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 ACOT9Q9Y305 439 aa11.99□□□□□ -0.49
SKA1-203ENST00000417656 USP24Q9UPU5 2620 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 PCM1Q15154 2024 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 OR2A25A4D2G3 310 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 SMIM23A6NLE4 172 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 SRRM3A6NNA2 597 aaPredicted RBP11.98□□□□□ -0.49
SKA1-203ENST00000417656 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.98□□□□□ -0.49
SKA1-203ENST00000417656 RRP8O43159 456 aaKnown RBP11.98□□□□□ -0.49
SKA1-203ENST00000417656 RAD1O60671 282 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 CTSVO60911 334 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 SCRG1O75711 98 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 KRT37O76014 449 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 CTSBP07858 339 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 ANXA5P08758 320 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 MSL3P1P0C860 447 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 SLC26A3P40879 764 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 GLRBP48167 497 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 ITGA1P56199 1179 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 PRDX1Q06830 199 aaKnown RBP11.98□□□□□ -0.49
SKA1-203ENST00000417656 COL9A2Q14055 689 aaPredicted RBP11.98□□□□□ -0.49
SKA1-203ENST00000417656 NAA25Q14CX7 972 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 TGFBIQ15582 683 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 C18orf21Q32NC0 220 aaPredicted RBP11.98□□□□□ -0.49
SKA1-203ENST00000417656 CAPN13Q6MZZ7 669 aaPredicted RBP11.98□□□□□ -0.49
SKA1-203ENST00000417656 EMBQ6PCB8 327 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 ADGRD1Q6QNK2 874 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 RNF44Q7L0R7 432 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 ADCK2Q7Z695 626 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 CCDC91Q7Z6B0 441 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 PAQR7Q86WK9 346 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 GPSM1Q86YR5 675 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 SPACA3Q8IXA5 215 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 OR8K5Q8NH50 307 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 CAVIN3Q969G5 261 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 KIAA1191Q96A73 305 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 FCRL4Q96PJ5 515 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 TMEM79Q9BSE2 394 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 NMRAL1Q9HBL8 299 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 IRAK4Q9NWZ3 460 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 EURLQ9NYK6 297 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 ANKMY1Q9P2S6 941 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 FETUBQ9UGM5 382 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 RNF112Q9ULX5 631 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 PLCL2Q9UPR0 1127 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 TMEM184BQ9Y519 407 aaPredicted RBP11.98□□□□□ -0.49
SKA1-203ENST00000417656 KLK4Q9Y5K2 254 aa11.98□□□□□ -0.49
SKA1-203ENST00000417656 A0A0J9YVX5 310 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 SUPT3HB4E1H0 165 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 UBXN8O00124 270 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 KLK10O43240 276 aa11.97□□□□□ -0.49
SKA1-203ENST00000417656 KERAO60938 352 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms