RNA–Protein interactions for RNA: ENST00000416098.1

NXF4-202, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

BASIC

Gene NXF4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-202ENST00000416098 KLHL29Q96CT2 875 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 ELP4Q96EB1 424 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 PDLIM5Q96HC4 596 aaKnown RBP5.37□□□□□ -1.55
NXF4-202ENST00000416098 FUCA2Q9BTY2 467 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 TRIM62Q9BVG3 475 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 ECT2Q9H8V3 914 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 SIX2Q9NPC8 291 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 MBNL1Q9NR56 388 aaKnown RBP5.37□□□□□ -1.55
NXF4-202ENST00000416098 GKN1Q9NS71 199 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 SPATS2LQ9NUQ6 558 aaKnown RBP5.37□□□□□ -1.55
NXF4-202ENST00000416098 ABCB8Q9NUT2 735 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.37□□□□□ -1.55
NXF4-202ENST00000416098 DUS2Q9NX74 493 aaKnown RBP5.37□□□□□ -1.55
NXF4-202ENST00000416098 GTSE1Q9NYZ3 720 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 DNAJC12Q9UKB3 198 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 VPS4AQ9UN37 437 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 OSGIN2Q9Y236 505 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 CPQQ9Y646 472 aa5.37□□□□□ -1.55
NXF4-202ENST00000416098 A0A1W2PRV1 198 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 SYCE3A1L190 88 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 SHISA7A6NL88 538 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 SPECC1L-ADORA2AF8WAN1 911 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 TMPRSS11DO60235 418 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 PRAMEF2O60811 474 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 HKR1P10072 659 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 COX7A2P14406 83 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 ERCC2P18074 760 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 FPR3P25089 353 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 USP8P40818 1118 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 COPB1P53618 953 aaKnown RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 VCPP55072 806 aaKnown RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 YBEYP58557 167 aaPredicted RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 DAOAP59103 153 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 GMFBP60983 142 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 UFM1P61960 85 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 YWHAGP61981 247 aaKnown RBP eCLIP5.36□□□□□ -1.55
NXF4-202ENST00000416098 TPM4P67936 248 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 BLOC1S1P78537 153 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 COG7P83436 770 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 ZXDBP98169 803 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 ADIGQ0VDE8 80 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 TMEM115Q12893 351 aaPredicted RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 LMAN2Q12907 356 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 RALGDSQ12967 914 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 DRAP1Q14919 205 aaPredicted RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 TBC1D25Q3MII6 688 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 DPY19L2P1Q6NXN4 242 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 CDC73Q6P1J9 531 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 PMF1Q6P1K2 205 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 GJB7Q6PEY0 223 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 LINC00696Q6ZRV3 163 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 WDR53Q7Z5U6 358 aaPredicted RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 RABEPKQ7Z6M1 372 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 SCD5Q86SK9 330 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 PEG10Q86TG7 708 aaKnown RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 VRK3Q8IV63 474 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 FAM71AQ8IYT1 594 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 PTGR2Q8N8N7 351 aaPredicted RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 ABHD11Q8NFV4 315 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 CCDC26Q8TAB7 109 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 UBA3Q8TBC4 463 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 KCNE4Q8WWG9 221 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 LINC00476Q8WZB0 136 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 MR1Q95460 341 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 CLDN23Q96B33 292 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 INTS12Q96CB8 462 aaKnown RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 TRMT61AQ96FX7 289 aaKnown RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 PERPQ96FX8 193 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 FAR2Q96K12 515 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 ZFYVE19Q96K21 471 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 ERGIC2Q96RQ1 377 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 THAP7Q9BT49 309 aaPredicted RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 ULBP1Q9BZM6 244 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 ABCG8Q9H221 673 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 LHX5Q9H2C1 402 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 HSD3B7Q9H2F3 369 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 EBF3Q9H4W6 596 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 VPS37BQ9H9H4 285 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 NMUR1Q9HB89 426 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 USP29Q9HBJ7 922 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 HPS4Q9NQG7 708 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 ABCC13Q9NSE7 274 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 OSER1Q9NX31 292 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 DLGAP2Q9P1A6 1054 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 LEF1Q9UJU2 399 aaPredicted RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 LSM7Q9UK45 103 aaKnown RBP5.36□□□□□ -1.55
NXF4-202ENST00000416098 ZNF510Q9Y2H8 683 aa5.36□□□□□ -1.55
NXF4-202ENST00000416098 LOC100509620A0A075B734 347 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 TBC1D3DA0A087WVF3 549 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 TBC1D3IA0A087WXS9 549 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 TBC1D3EA0A087X179 549 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 TBC1D3KA0A087X1G2 549 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 TBC1D3BA6NDS4 549 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 TBC1D3FA6NER0 549 aaPredicted RBP5.35□□□□□ -1.55
NXF4-202ENST00000416098 ERICH4A6NGS2 130 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 C2orf81A6NN90 581 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 LINC00473A8K010 186 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 CDRT15L2A8MXV6 281 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 TBC1D3LB9A6J9 549 aa5.35□□□□□ -1.55
NXF4-202ENST00000416098 F8VZ95 297 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms