RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 PRKAR1AP10644 381 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 PORP16435 677 aaPredicted RBP4.33□□□□□ -1.72
ATG4C-204ENST00000414558 CAPN2P17655 700 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 LY6DQ14210 128 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 NUP54Q7Z3B4 507 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 LGI2Q8N0V4 545 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 CFAP61Q8NHU2 1237 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 MIPOL1Q8TD10 442 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 PIGBQ92521 554 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 C4orf45Q96LM5 186 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 AGAP4Q96P64 663 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 LPAR4Q99677 370 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 IL17BQ9UHF5 180 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 DDX25Q9UHL0 483 aaKnown RBP4.33□□□□□ -1.72
ATG4C-204ENST00000414558 TP53TG3Q9ULZ0 132 aa4.33□□□□□ -1.72
ATG4C-204ENST00000414558 A0A1W2PPR1 153 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 A8MV72 311 aaPredicted RBP4.32□□□□□ -1.72
ATG4C-204ENST00000414558 KRT33AO76009 404 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 IGHV3-13P01766 116 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 GP1BBP13224 206 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 MPZP25189 248 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 MAPK12P53778 367 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 PAX8Q06710 450 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 STK4Q13043 487 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 PRR27Q6MZM9 219 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 FAM198BQ6UWH4 519 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 FRRS1Q6ZNA5 592 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 CATSPERDQ86XM0 798 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 DNAAF5Q86Y56 855 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 NDUFAF2Q8N183 169 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 NYXQ9GZU5 481 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 FAM120CQ9NX05 1096 aaKnown RBP4.32□□□□□ -1.72
ATG4C-204ENST00000414558 GPR34Q9UPC5 381 aa4.32□□□□□ -1.72
ATG4C-204ENST00000414558 ASB14A6NK59 587 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 TEX28O15482 410 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 RAB40ALP0C0E4 278 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 RPL35AP18077 110 aaKnown RBP4.31□□□□□ -1.72
ATG4C-204ENST00000414558 PTGER4P35408 488 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 LMAN1P49257 510 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 MYL7Q01449 175 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 ITGA7Q13683 1181 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 MCMDC2Q4G0Z9 681 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 CES4AQ5XG92 561 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 LEKR1Q6ZMV7 388 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 ADGRA1Q86SQ6 560 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 METTL4Q8N3J2 472 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 TDRD5Q8NAT2 981 aaKnown RBP4.31□□□□□ -1.72
ATG4C-204ENST00000414558 SLC37A3Q8NCC5 494 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 LRRC15Q8TF66 581 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 SLC45A3Q96JT2 553 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 ZMYND12Q9H0C1 365 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 TLE6Q9H808 572 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 PDE7BQ9NP56 450 aa4.31□□□□□ -1.72
ATG4C-204ENST00000414558 LOC105371242A0A075B767 164 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 A0A1W2PPQ1 181 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 HPRP00739 348 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 IRF2P14316 349 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 AZU1P20160 251 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 EIF5P55010 431 aaKnown RBP4.3□□□□□ -1.72
ATG4C-204ENST00000414558 XGP55808 180 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 HNRNPKP61978 463 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATG4C-204ENST00000414558 COX10Q12887 443 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 MTF1Q14872 753 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 SYT2Q8N9I0 419 aaPredicted RBP4.3□□□□□ -1.72
ATG4C-204ENST00000414558 AQP11Q8NBQ7 271 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 C17orf47Q8NEP4 570 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 HOXD1Q9GZZ0 328 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 GOLPH3LQ9H4A5 285 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 ANKZF1Q9H8Y5 726 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 MYNNQ9NPC7 610 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 B3GAT2Q9NPZ5 323 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 PRR34Q9NV39 138 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 PRMT7Q9NVM4 692 aaPredicted RBP4.3□□□□□ -1.72
ATG4C-204ENST00000414558 NSMCE4AQ9NXX6 385 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 CPSF2Q9P2I0 782 aaKnown RBP4.3□□□□□ -1.72
ATG4C-204ENST00000414558 SLC24A2Q9UI40 661 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 PCDHGB4Q9UN71 923 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 WIPI2Q9Y4P8 454 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 R4GN57 208 aa4.3□□□□□ -1.72
ATG4C-204ENST00000414558 A0A087WUV0 522 aaPredicted RBP4.29□□□□□ -1.72
ATG4C-204ENST00000414558 PI4K2BG5E9Z4 385 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 DNA2P51530 1060 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 CDH18Q13634 790 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 TAB1Q15750 504 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 HYIQ5T013 277 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 OR4K1Q8NGD4 311 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 OR5T2Q8NGG2 359 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 MOB3AQ96BX8 217 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 CHKBQ9Y259 395 aa4.29□□□□□ -1.72
ATG4C-204ENST00000414558 SNURFLB1AK76 121 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 FPGTO14772 594 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 TFECO14948 347 aaPredicted RBP4.28□□□□□ -1.72
ATG4C-204ENST00000414558 CEACAM4O75871 244 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 BEST1O76090 585 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 THEGLP0DJG4 465 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 LIG4P49917 911 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 VAMP7P51809 220 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 PEX6Q13608 980 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 CUL3Q13618 768 aa4.28□□□□□ -1.72
ATG4C-204ENST00000414558 SIM2Q14190 667 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms