RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 DENND1AQ8TEH3 1009 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 AGAP11Q8TF27 550 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 MUC13Q9H3R2 512 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 C1orf109Q9NX04 203 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 SPATA7Q9P0W8 599 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 RABL2AQ9UBK7 228 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 GPN3Q9UHW5 284 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CDC14AQ9UNH5 594 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 OARD1Q9Y530 152 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 H7C0S8 307 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 MGRN1O60291 552 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 PSIP1O75475 530 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 PPM1BO75688 479 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 ALBP02768 609 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 EBLN1P0CF75 366 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CD1DP15813 335 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 BDKRB1P46663 353 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 LGALS3BPQ08380 585 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 C6orf89Q6UWU4 347 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CAMKVQ8NCB2 501 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 WDR48Q8TAF3 677 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 NELL1Q92832 810 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CDRT15Q96T59 188 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 HOPXQ9BPY8 73 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 BDH2Q9BUT1 245 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 TBC1D23Q9NUY8 699 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 WNT16Q9UBV4 365 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CIDEBQ9UHD4 219 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 ATP6V1HQ9UI12 483 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 PPM1HQ9ULR3 514 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 EIF4E1BA6NMX2 242 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CLDN4O14493 209 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 AP1G1O43747 822 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 IFNA16P05015 189 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SLC35E2BP0CK96 405 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 TCN1P20061 433 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CDK3Q00526 305 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 INTS11Q5TA45 600 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SLC25A24Q6NUK1 477 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 IZUMO2Q6UXV1 221 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 PATL1Q86TB9 770 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 DSELQ8IZU8 1212 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 OR13J1Q8NGT2 312 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 C10orf82Q8WW14 230 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 C19orf43Q9BQ61 176 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CD244Q9BZW8 370 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CXorf56Q9H5V9 222 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 FZD3Q9NPG1 666 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SLC22A14Q9Y267 594 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 OR1A2Q9Y585 309 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 LINC00854A0A1B0GVQ3 168 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 MATN2O00339 956 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 ABCB1P08183 1280 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 EPS8Q12929 822 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 GNA13Q14344 377 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SLBPQ14493 270 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 TYSND1Q2T9J0 566 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 PDCD4Q53EL6 469 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 TECRLQ5HYJ1 363 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CPTPQ5TA50 214 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 ALG1LQ6GMV1 187 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 TMEM145Q8NBT3 493 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SMRP1Q8NCR6 262 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 DDHD1Q8NEL9 900 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 TRPV3Q8NET8 790 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SETD7Q8WTS6 366 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SLC5A11Q8WWX8 675 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 ESAMQ96AP7 390 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 PYCR2Q96C36 320 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 ITCHQ96J02 903 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 NSMCE2Q96MF7 247 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 LYSMD1Q96S90 227 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 C1orf50Q9BV19 199 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 UGT2B28Q9BY64 529 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 METTL8Q9H825 291 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CAPN10Q9HC96 672 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SPAG4Q9NPE6 437 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 DLGAP2Q9P1A6 1054 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 C14orf166Q9Y224 244 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 PRELID1Q9Y255 219 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 POLR3HQ9Y535 204 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 AURKAO14965 403 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 PEX1O43933 1283 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 ANXA4P09525 319 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CD38P28907 300 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 MAGEA2P43356 314 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 MAGEA3P43357 314 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 RPS14P62263 151 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CREB5Q02930 508 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 CSTF1Q05048 431 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 HEPACAMQ14CZ8 416 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 AMZ1Q400G9 498 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 FRG2Q64ET8 278 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 Q6ZSR6 202 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SLC44A2Q8IWA5 706 aaPredicted RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 RBM12BQ8IXT5 1001 aaKnown RBP8.29□□□□□ -1.08
SYNE1-211ENST00000413186 SPEM1Q8N4L4 309 aa8.29□□□□□ -1.08
SYNE1-211ENST00000413186 ZFRQ96KR1 1074 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms