RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LOC100506127A0A0U1RQW1 187 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 H3BQ06 376 aaPredicted RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 ITGB1BP1O14713 200 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 DPM1O60762 260 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 PRDM1O75626 825 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 FTH1P02794 183 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 ALPLP05186 524 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 C2P06681 752 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 CHRNGP07510 517 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 COX4I1P13073 169 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 EEF1B2P24534 225 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 SCNN1AP37088 669 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 KCNJ1P48048 391 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 GPR143P51810 404 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 WNT7BP56706 349 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 RHDQ02161 417 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 BST1Q10588 318 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 GRAPQ13588 217 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 UBAP2LQ14157 1087 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 BAK1Q16611 211 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SLC5A12Q1EHB4 618 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 C2CD6Q53TS8 623 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 DDI2Q5TDH0 399 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 MSANTD2Q6P1R3 559 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 KCNT2Q6UVM3 1135 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SLC36A4Q6YBV0 504 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 TPGS1Q6ZTW0 290 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 CHST15Q7LFX5 561 aaPredicted RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 KDELC2Q7Z4H8 507 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SPRED1Q7Z699 444 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 PAQR7Q86WK9 346 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 CTAGE3PQ8IX95 158 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 GLIS3Q8NEA6 775 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 NDNFQ8TB73 568 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 GPBAR1Q8TDU6 330 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 FAM216AQ8WUB2 273 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 TNFRSF14Q92956 283 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SLC35C1Q96A29 364 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 RFT1Q96AA3 541 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 BSCL2Q96G97 398 aaPredicted RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 SLC45A3Q96JT2 553 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 ASB16Q96NS5 453 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 COL21A1Q96P44 957 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 DPH7Q9BTV6 452 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SLAMF7Q9NQ25 335 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 TBC1D24Q9ULP9 559 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 WASF3Q9UPY6 502 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 LOXHD1Q8IVV2 1947 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 A0A0B4J293 547 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SLC15A5A6NIM6 579 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SLC43A1O75387 559 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 ZSCAN5DPP0CG00 497 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SAGP10523 405 aaPredicted RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 ARSBP15848 533 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 TPH1P17752 444 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 ETV6P41212 452 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 RFX2P48378 723 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 KCNC1P48547 511 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 MAZP56270 477 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 MRPS11P82912 194 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 PRKAA1Q13131 559 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 FAM189A2Q15884 450 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 DGUOKQ16854 277 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 BCL7AQ4VC05 210 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 FAM26FQ5R3K3 315 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 PNCKQ6P2M8 343 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 ADAT2Q7Z6V5 191 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 ZC3HC1Q86WB0 502 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 NKAPQ8N5F7 415 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 PCNPQ8WW12 178 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 RNF31Q96EP0 1072 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 PEX11GQ96HA9 241 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 CMSS1Q9BQ75 279 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 CHCHD6Q9BRQ6 235 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SEPSECSQ9HD40 501 aaKnown RBP5.1□□□□□ -1.59
HERC4-205ENST00000412272 SAYSD1Q9NPB0 183 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.1□□□□□ -1.59
HERC4-205ENST00000412272 DUSP22Q9NRW4 184 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 WBP1LQ9NX94 342 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 NDUFAF4Q9P032 175 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 DNAJC5BQ9UF47 199 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 STARD10Q9Y365 291 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 IQCF5A8MTL0 148 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 NPIPB8E9PQR5 432 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 TRIM24O15164 1050 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 HPGDSO60760 199 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 SEC24AO95486 1093 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 BPGMP07738 259 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 USP17L7P0C7H9 530 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 UQCRFS1P1P0C7P4 283 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 C6P13671 934 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 RFC3P40938 356 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 RAP1GAPP47736 663 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 FPGSQ05932 587 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 UAP1L1Q3KQV9 507 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 ADPRMQ3LIE5 342 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 AFMIDQ63HM1 303 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 CDC73Q6P1J9 531 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 MBOAT1Q6ZNC8 495 aa5.1□□□□□ -1.59
HERC4-205ENST00000412272 NRARPQ7Z6K4 114 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms