RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 POLR3HQ9Y535 204 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 KCNE1BA0A087WTH5 132 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MAGEA13PA6NCF6 341 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 OR2AG2A6NM03 316 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 AP1G1O43747 822 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SEC22BO75396 215 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MTX2O75431 263 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 RECQL5O94762 991 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 GPIP06744 558 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 C6P13671 934 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 UQCRBP14927 111 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 PSMC3P17980 439 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 EPORP19235 508 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 PEX2P28328 305 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 HTR1EP28566 365 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 GJA4P35212 333 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 OPRD1P41143 372 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 HNF4AP41235 474 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 GPR1P46091 355 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ERFP50548 548 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 HNRNPFP52597 415 aaKnown RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 CTSCP53634 463 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 RPL38P63173 70 aaKnown RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 CSTF3Q12996 717 aaKnown RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TIGD2Q4W5G0 525 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 FRG2Q64ET8 278 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ANO7Q6IWH7 933 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TMEM220Q6QAJ8 160 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 VITQ6UXI7 678 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MBOAT1Q6ZNC8 495 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MSANTD1Q6ZTZ1 278 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 PROSER1Q86XN7 944 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ZNF366Q8N895 744 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TNIP2Q8NFZ5 429 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 CSGALNACT1Q8TDX6 532 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 CXorf40AQ8TE69 158 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 VPS33AQ96AX1 596 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ELSPBP1Q96BH3 223 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ZFYVE19Q96K21 471 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 TEX37Q96LM6 180 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 FRG2BQ96QU4 278 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 OSBPL6Q9BZF3 934 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 DPY30Q9C005 99 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 PCDHAC1Q9H158 963 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 DPEP2Q9H4A9 486 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ACTL8Q9H568 366 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 PIF1Q9H611 641 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 C8orf4Q9NR00 106 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 CMTM6Q9NX76 183 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 MBD1Q9UIS9 605 aaPredicted RBP7.28□□□□□ -1.24
CXCR4-202ENST00000409817 SNX13Q9Y5W8 968 aa7.28□□□□□ -1.24
CXCR4-202ENST00000409817 ATG2AQ2TAZ0 1938 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 ASPDHA6ND91 283 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 OTOL1A6NHN0 477 aaPredicted RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 ARHGEF33A8MVX0 844 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 GPR89AB7ZAQ6 455 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 H0YIV9 168 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 H3BM21 787 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 FFAR3O14843 346 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 GPR42O15529 346 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 HNRNPRO43390 633 aaKnown RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 KAT7O95251 611 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 KCNH1O95259 989 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 SOD1P00441 154 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 APODP05090 189 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 GPR89BP0CG08 455 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 FCGR1AP12314 374 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 HLA-EP13747 358 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 HOXB6P17509 224 aaKnown RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 IL10P22301 178 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 PSMA4P25789 261 aaKnown RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 TEAD1P28347 426 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 IL12AP29459 219 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 MSX2P35548 267 aaPredicted RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 CASP2P42575 452 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 PFN3P60673 137 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 RPA4Q13156 261 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 MED21Q13503 144 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 ENPP2Q13822 863 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 E2F2Q14209 437 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 KIAA0040Q15053 153 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 CPSF6Q16630 551 aaKnown RBP eCLIP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 DPY19L1Q2PZI1 675 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 GRAMD1BQ3KR37 738 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 ZNF658BQ4V348 819 aaPredicted RBP7.27□□□□□ -1.25
CXCR4-202ENST00000409817 MTX3Q5HYI7 312 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 PAGE3Q5JUK9 113 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 ATAT1Q5SQI0 421 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 RAET1GQ6H3X3 334 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 TANGO2Q6ICL3 276 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 NANOGP8Q6NSW7 305 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 ANKRD54Q6NXT1 300 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 NEK5Q6P3R8 708 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 TICAM1Q8IUC6 712 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 FAM156AQ8NDB6 213 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 OR56A3Q8NH54 315 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 HM13Q8TCT9 377 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 SLC13A3Q8WWT9 602 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 STARD8Q92502 1023 aa7.27□□□□□ -1.25
CXCR4-202ENST00000409817 SLC45A3Q96JT2 553 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms