RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ERVK-6Q9BXR3 956 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 SRRQ9GZT4 340 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 SPNS1Q9H2V7 528 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 WASH6PQ9NQA3 447 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 OLA1Q9NTK5 396 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 LRFN2Q9ULH4 789 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 STUB1Q9UNE7 303 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 DIMT1Q9UNQ2 313 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 PCDHB7Q9Y5E2 793 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 PCDHB5Q9Y5E4 795 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 SSX4O60224 188 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 HS6ST1O60243 411 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 FAM20BO75063 409 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC22A3O75751 556 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 FADS2O95864 444 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 C1RP00736 705 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 CYBBP04839 570 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 ITGB1P05556 798 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 STAG3L1P0CL83 205 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 HOXB3P14651 431 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 HOXB8P17481 243 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 ATF4P18848 351 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 ALAS2P22557 587 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 FSHRP23945 695 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 GADD45AP24522 165 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 CA5AP35218 305 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 MAGEA2P43356 314 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 RPL34P49207 117 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 EFNA5P52803 228 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 AP1S2P56377 157 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF33BQ06732 778 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 TIGD6Q17RP2 521 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 PKDCCQ504Y2 493 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 RAB6CQ53S08 254 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 PAGE3Q5JUK9 113 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 SDE2Q6IQ49 451 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 TXNDC11Q6PKC3 985 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 DLEU7Q6UYE1 221 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 PID1Q7Z2X4 250 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 METTL3Q86U44 580 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 NT5DC4Q86YG4 428 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 CHPFQ8IZ52 775 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 CHCHD4Q8N4Q1 142 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 YIPF7Q8N8F6 280 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 LPPQ93052 612 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 C18orf25Q96B23 403 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 NECAB3Q96P71 396 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 MCCC1Q96RQ3 725 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 OMDQ99983 421 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 ELOVL4Q9GZR5 314 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 RACGAP1Q9H0H5 632 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 RAB6CQ9H0N0 254 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 ENTPD7Q9NQZ7 604 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 TMEM161AQ9NX61 479 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC39A1Q9NY26 324 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 PNMA8BQ9ULN7 279 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 PIN4Q9Y237 131 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 MAGED1Q9Y5V3 778 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 V9GYH0 126 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 PCM1Q15154 2024 aa10.35□□□□□ -0.75
NIF3L1-204ENST00000409357 NT5C1B-RDH14C9J2C7 533 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 RFPL3O75679 317 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 RECQL5O94762 991 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 LGI1O95970 557 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 HLA-DQB1P01920 261 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 LCKP06239 509 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 IGFBP5P24593 272 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 NRIP1P48552 1158 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 POLR2JP52435 117 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC12A2P55011 1212 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 RHAGQ02094 409 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MAB21L1Q13394 359 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PWP1Q13610 501 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 DGCR6Q14129 220 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 GRK1Q15835 563 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 COL28A1Q2UY09 1125 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 BTBD16Q32M84 506 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SETMARQ53H47 684 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ALFQ53S48 1182 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 LRRC66Q68CR7 880 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SPESP1Q6UW49 350 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 DET1Q7L5Y6 550 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 DGLUCYQ7Z3D6 616 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 BMP8AQ7Z5Y6 402 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 DDX53Q86TM3 631 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 IFNEQ86WN2 208 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 ZFAND4Q86XD8 727 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 MFSD6LQ8IWD5 586 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 GHDCQ8N2G8 530 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 DNAAF3Q8N9W5 541 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 RNF149Q8NC42 400 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 C3orf58Q8NDZ4 430 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 OR7G3Q8NG95 312 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 DNAJB8Q8NHS0 232 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 TWIST2Q8WVJ9 160 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 BTN2A2Q8WVV5 523 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SMG7Q92540 1137 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 PYCR2Q96C36 320 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC47A1Q96FL8 570 aa10.34□□□□□ -0.75
NIF3L1-204ENST00000409357 RADILQ96JH8 1075 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms