RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 Q8N402 240 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 TMEM169Q96HH4 297 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 FIZ1Q96SL8 496 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 OCEL1Q9H607 264 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 MS4A12Q9NXJ0 267 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 TRPV2Q9Y5S1 764 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 PEAK1Q9H792 1746 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CAPN15O75808 1086 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 IFNA6P05013 189 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 NPRL3Q12980 569 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 GANABQ14697 944 aaKnown RBP17.24■□□□□ 0.35
SMPD4-202ENST00000409031 OR4F3Q6IEY1 312 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 ARMC6Q6NXE6 501 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 OXR1Q8N573 874 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 METTL25Q8N6Q8 603 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 C15orf40Q8WUR7 153 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 POPDC3Q9HBV1 291 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 CNTNAP1P78357 1384 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 PSEN2P49810 448 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 NFKB2Q00653 900 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 BIKQ13323 160 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 SNX33Q8WV41 574 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 PSMG2Q969U7 264 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 MOCOSQ96EN8 888 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 MGME1Q9BQP7 344 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 PPIL3Q9H2H8 161 aaKnown RBP17.24■□□□□ 0.35
SMPD4-202ENST00000409031 OLAHQ9NV23 265 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 RIIAD1A6NNX1 92 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 CXCL11O14625 94 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 EFNA1P20827 205 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-202ENST00000409031 ADCYAP1R1P41586 468 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 NAE1Q13564 534 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 SLC25A24Q6NUK1 477 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 ADGRG5Q8IZF4 528 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 OR4F6Q8NGB9 312 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 TIFAQ96CG3 184 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 IFT27Q9BW83 186 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 WDR6Q9NNW5 1121 aaKnown RBP17.24■□□□□ 0.35
SMPD4-202ENST00000409031 COL1A2P08123 1366 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 TLR5O60602 858 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 MATN4O95460 622 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 SMIM18P0DKX4 95 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 CD247P20963 164 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF10P21506 573 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-202ENST00000409031 GGT5P36269 586 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 PTGES3Q15185 160 aaKnown RBP17.24■□□□□ 0.35
SMPD4-202ENST00000409031 DSG4Q86SJ6 1040 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 PLCZ1Q86YW0 608 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 LINC00471Q8N535 108 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 NDNFQ8TB73 568 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 SCRN2Q96FV2 425 aa17.24■□□□□ 0.35
SMPD4-202ENST00000409031 CDC7O00311 574 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 INSIG1O15503 277 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 GSTM3P21266 225 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 NOL9Q5SY16 702 aaKnown RBP17.23■□□□□ 0.35
SMPD4-202ENST00000409031 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-202ENST00000409031 NCEH1Q6PIU2 408 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 TMPRSS11BQ86T26 416 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 GDPD1Q8N9F7 314 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 PIGKQ92643 395 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 COL26A1Q96A83 441 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 GOLGA2P5Q9HBQ8 144 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 HCN3Q9P1Z3 774 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 SLIT2O94813 1529 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 FXYD6-FXYD2A0A087WZ82 144 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 HMGN1P05114 100 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 TLX1P31314 330 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-202ENST00000409031 RGS8P57771 180 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-202ENST00000409031 ZDHHC20Q5W0Z9 365 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 MED27Q6P2C8 311 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 FAM98AQ8NCA5 519 aaKnown RBP17.23■□□□□ 0.35
SMPD4-202ENST00000409031 RAD51AP1Q96B01 352 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 FXYD6Q9H0Q3 95 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 MAGEH1Q9H213 219 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 DAPL1A0PJW8 107 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 H3BM21 787 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 PDCD5O14737 125 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 SLC19A2O60779 497 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 FUCA1P04066 466 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 C8GP07360 202 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 LMO2P25791 158 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 C15orf39Q6ZRI6 1047 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 SERPINA9Q86WD7 417 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 DENND1CQ8IV53 801 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 PAPD5Q8NDF8 572 aaKnown RBP17.23■□□□□ 0.35
SMPD4-202ENST00000409031 RHEBL1Q8TAI7 183 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 ARL5AQ9Y689 179 aa17.23■□□□□ 0.35
SMPD4-202ENST00000409031 A0A1W2PQH9 124 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 HMX3A6NHT5 357 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 TSPAN1O60635 241 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 NIPSNAP2O75323 286 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 SPAM1P38567 509 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 PIK3CBP42338 1070 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 RBM34P42696 430 aaKnown RBP17.22■□□□□ 0.35
SMPD4-202ENST00000409031 GSTM4Q03013 218 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 CDK5R2Q13319 367 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 UNC50Q53HI1 259 aa17.22■□□□□ 0.35
SMPD4-202ENST00000409031 MSANTD2Q6P1R3 559 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms