RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 HIST1H2AJQ99878 128 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 SH3GL1Q99961 368 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 H2AFJQ9BTM1 129 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 NTMT1Q9BV86 223 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 OSBPL11Q9BXB4 747 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 CD244Q9BZW8 370 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 ZDHHC5Q9C0B5 715 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 ZDHHC6Q9H6R6 413 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 NOL11Q9H8H0 719 aaKnown RBP12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 IL26Q9NPH9 171 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 DKK4Q9UBT3 224 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 BTRCQ9Y297 605 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 PTPRBP23467 1997 aa12.56□□□□□ -0.4
SMARCB1-203ENST00000407082 PRORSD1PA6NEY8 169 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 ATXN7O15265 892 aaPredicted RBP12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 LEFTY1O75610 366 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 AP2A2O94973 939 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 TNFAIP8O95379 198 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 KRT6AP02538 564 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 PRNPP04156 253 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 KRT6BP04259 564 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CTSLP07711 333 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 UBTFL6P0CB48 400 aaPredicted RBP12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 C7P10643 843 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 ACADMP11310 421 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 EPB42P16452 691 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 MAPK1P28482 360 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 GKP32189 559 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 KRT6CP48668 564 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 AGTR2P50052 363 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 HNMTP50135 292 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 HK3P52790 923 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 FOXA1P55317 472 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 RPS14P62263 151 aaKnown RBP12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 ZNF33BQ06732 778 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 SP140Q13342 867 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CHRNA6Q15825 494 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CST6Q15828 149 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CDKN3Q16667 212 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 VPS26BQ4G0F5 336 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 PLEKHS1Q5SXH7 462 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 GPRC6AQ5T6X5 926 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 FAM46CQ5VWP2 391 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 OR52E8Q6IFG1 317 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 IL27RAQ6UWB1 636 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 SBSNQ6UWP8 590 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 LAYNQ6UX15 382 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 NEK10Q6ZWH5 1172 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CACUL1Q86Y37 369 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 RAVER1Q8IY67 606 aaKnown RBP12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 DPP10Q8N608 796 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CDYL2Q8N8U2 506 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 TMEM102Q8N9M5 508 aaPredicted RBP12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 TMIEQ8NEW7 156 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 PPWD1Q96BP3 646 aaKnown RBP12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC45A3Q96JT2 553 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 KCNA7Q96RP8 456 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 MCCC1Q96RQ3 725 aaPredicted RBP12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CDC6Q99741 560 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 PKP2Q99959 881 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 IPPKQ9H8X2 491 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CD93Q9NPY3 652 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 TM7SF3Q9NS93 570 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CCM2LQ9NUG4 571 aaPredicted RBP12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 MAP10Q9P2G4 905 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 PACSIN3Q9UKS6 424 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 TIMM22Q9Y584 194 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 SCN8AQ9UQD0 1980 aa12.55□□□□□ -0.4
SMARCB1-203ENST00000407082 CELSR3Q9NYQ7 3312 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 A0A1B0GTW7 788 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 C1QTNF3-AMACRE9PGA6 284 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 KPNA3O00505 521 aaPredicted RBP12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 MID1O15344 667 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 STK16O75716 305 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 ADH1BP00325 375 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 DNTTP04053 509 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 CAPN1P07384 714 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 BMP2P12643 396 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 CYP2A7P20853 494 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 HTR1EP28566 365 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 ERVPABLB-1P60509 514 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 NR6A1Q15406 480 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 IMPG1Q17R60 797 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 POM121L1PQ3SYA9 428 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 CRTC1Q6UUV9 634 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 GDPD4Q6W3E5 623 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 LRRC69Q6ZNQ3 347 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 LRRC70Q7Z2Q7 622 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 ZFAND4Q86XD8 727 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 PTRH1Q86Y79 214 aaKnown RBP12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 HID1Q8IV36 788 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC15A3Q8IY34 581 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 ANKFN1Q8N957 763 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 OR4F6Q8NGB9 312 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 OR9I1Q8NGQ6 314 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 TSC22D3Q99576 134 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 KCTD14Q9BQ13 255 aaPredicted RBP12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 C9orf16Q9BUW7 83 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 ASIC5Q9NY37 505 aa12.54□□□□□ -0.4
SMARCB1-203ENST00000407082 IKZF3Q9UKT9 509 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms