RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 ACACBO00763 2458 aa5.51□□□□□ -1.53
GAPDHP42-201ENST00000406848 RP1P56715 2156 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ZFC3H1O60293 1989 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 TRABD2BA6NFA1 517 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 OR2AG2A6NM03 316 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 B4E171 279 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 FAM47E-STBD1D6RA91 191 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 E7ESA3 106 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 PPM1DO15297 605 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 NVLO15381 856 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 B4GAT1O43505 415 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 SNX2O60749 519 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 MTX2O75431 263 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 GPC4O75487 556 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 SPAG6O75602 509 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 UBXN7O94888 489 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 SLCO2B1O94956 709 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 SEC31AO94979 1220 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 C9P02748 559 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ITGA2BP08514 1039 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CBSLP0DN79 551 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 MTHFD1P11586 935 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ENO3P13929 434 aaPredicted RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 AMD1P17707 334 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CD1CP29017 333 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 RBMS1P29558 406 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ALDH4A1P30038 563 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CBSP35520 551 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 HSD17B2P37059 387 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 TSPAN7P41732 249 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ARCN1P48444 511 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 VPS41P49754 854 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 SEPHS1P49903 392 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CTSCP53634 463 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CCL7P80098 99 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 FOXD4Q12950 439 aaPredicted RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 PRKAA1Q13131 559 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 OLIG2Q13516 323 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 KRT33BQ14525 404 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 PTPRCAPQ14761 206 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 NAA25Q14CX7 972 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 RPE65Q16518 533 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 TTLL9Q3SXZ7 439 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 KHDC1Q4VXA5 237 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CCDC38Q502W7 563 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 KCTD16Q68DU8 428 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 PTRHD1Q6GMV3 140 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ARMC6Q6NXE6 501 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 UNQ6494/PRO21346Q6UXR6 183 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 UNC5DQ6UXZ4 953 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 KDM7AQ6ZMT4 941 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CENPUQ71F23 418 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ZNF534Q76KX8 674 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CILP2Q8IUL8 1156 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 KLHL7Q8IXQ5 586 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 PIANPQ8IYJ0 282 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CFAP206Q8IYR0 622 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 TBC1D21Q8IYX1 336 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 RAB42Q8N4Z0 105 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CEP112Q8N8E3 955 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ANKRD42Q8N9B4 389 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 OR8K5Q8NH50 307 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ANKRD7Q92527 254 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 FGF11Q92914 225 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 SLC22A18Q96BI1 424 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 FOPNLQ96NB1 174 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 DPH1Q9BZG8 443 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CHRNA10Q9GZZ6 450 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 TFB2MQ9H5Q4 396 aaKnown RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 KIR3DX1Q9H7L2 352 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 COG4Q9H9E3 785 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 PRDM8Q9NQV8 689 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 CCM2LQ9NUG4 571 aaPredicted RBP5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 SYBUQ9NX95 663 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 LUZP4Q9P127 313 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 SEMA5BQ9P283 1151 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 MAD1L1Q9Y6D9 718 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 RPS6KL1Q9Y6S9 549 aa5.5□□□□□ -1.53
GAPDHP42-201ENST00000406848 ACACAQ13085 2346 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 MN1Q10571 1320 aaPredicted RBP5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 DMXL1Q9Y485 3027 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 ZCWPW2A0A1B0GU75 182 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 A0A1W2PQM1 296 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 SLC5A10A0PJK1 596 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 CTAGE15A4D2H0 777 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 ZNF839A8K0R7 811 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 TTI1O43156 1089 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 RRP8O43159 456 aaKnown RBP5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 SGTAO43765 313 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 PIP5K1CO60331 668 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 URI1O94763 535 aaPredicted RBP5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 TMEM63AO94886 807 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 MSL3P1P0C860 447 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 CTAGE8P0CG41 777 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 THRAP10827 490 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 PKMP14618 531 aaKnown RBP5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 BRAFP15056 766 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 NMBRP28336 390 aa5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 CSTF2P33240 577 aaKnown RBP eCLIP5.49□□□□□ -1.53
GAPDHP42-201ENST00000406848 LSP1P33241 339 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms