RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ZDHHC3Q9NYG2 299 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 KLHL42Q9P2K6 505 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 INSL5Q9Y5Q6 135 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ATG2AQ2TAZ0 1938 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 GOLGA8CPA6NN73 597 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 NPC1O15118 1278 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 HS6ST1O60243 411 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 LILRB3O75022 631 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 ATP6V1G1O75348 118 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 WBP4O75554 376 aaKnown RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 DIRAS1O95057 198 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 GABARAPO95166 117 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 FUT4P22083 530 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 TGFBR1P36897 503 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 TGFBR2P37173 567 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 NSG1P42857 185 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 C21orf58P58505 322 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 CDH18Q13634 790 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 PTCHD3Q3KNS1 767 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 CDKL4Q5MAI5 379 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 CACHD1Q5VU97 1274 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 LYPLAL1Q5VWZ2 237 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 TTC23Q5W5X9 447 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 DOK6Q6PKX4 331 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 LRRC70Q7Z2Q7 622 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 GIPC3Q8TF64 312 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 MYLIPQ8WY64 445 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 GFM2Q969S9 779 aaKnown RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 CMTM7Q96FZ5 175 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 OR4K3Q96R72 315 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 DPH2Q9BQC3 489 aaPredicted RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 GPATCH2Q9NW75 528 aa9.56□□□□□ -0.88
MSH2-202ENST00000406134 KIAA1522Q9P206 1035 aaPredicted RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 NDRG4Q9ULP0 352 aaKnown RBP9.56□□□□□ -0.88
MSH2-202ENST00000406134 PRAMEF25A6NGN4 478 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 ZSCAN9O15535 394 aaPredicted RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 MAN1A2O60476 641 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 MAGEA10P43363 369 aaPredicted RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 MAP2K4P45985 399 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 RAB33AQ14088 237 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 SPIDRQ14159 915 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 DOC2BQ14184 412 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 TPGS2Q68CL5 300 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 GRAMD4Q6IC98 578 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 GALNT18Q6P9A2 607 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 HTR3DQ70Z44 454 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 FKBP9P1Q75LS8 142 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 GALNT5Q7Z7M9 940 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 ZNF554Q86TJ5 538 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 HS6ST3Q8IZP7 471 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 OR2AP1Q8NGE2 309 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 FIBINQ8TAL6 211 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 TRUB1Q8WWH5 349 aaKnown RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 C7orf34Q96L11 122 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 ZNF300Q96RE9 604 aaPredicted RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 FAM83CQ9BQN1 747 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 EBPLQ9BY08 206 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 ADNPQ9H2P0 1102 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 KCTD5Q9NXV2 234 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 ERVK-18Q9QC07 812 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 CRLS1Q9UJA2 301 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 LRFN2Q9ULH4 789 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 DGKBQ9Y6T7 804 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 GPX2P18283 190 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 CD300CQ08708 224 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 ABHD18Q0P651 414 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 CCSMST1Q4G0I0 132 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 TPRG1Q6ZUI0 275 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 FAM124AQ86V42 546 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 TCEAL8Q8IYN2 117 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 CLECL1Q8IZS7 167 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 CENPSQ8N2Z9 138 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 SYNPOQ8N3V7 929 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 CPXM2Q8N436 756 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 MFSD4AQ8N468 514 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 PIK3C3Q8NEB9 887 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 NDNFQ8TB73 568 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 SNRNP27Q8WVK2 155 aaKnown RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 ABTB1Q969K4 478 aaPredicted RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 THAP11Q96EK4 314 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 SPATA6Q9NWH7 488 aaPredicted RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 SLC22A14Q9Y267 594 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 EYSQ5T1H1 3165 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 PFDN1O60925 122 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 JRKO75564 520 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 NUDT7P0C024 238 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 MVDP53602 400 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 LIMK1P53667 647 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 LDLRAP1Q5SW96 308 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 NOXRED1Q6NXP6 359 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 FAHD1Q6P587 224 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 UBE2R2Q712K3 238 aaPredicted RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 ZDHHC21Q8IVQ6 265 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 SLC39A11Q8N1S5 342 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 SH3YL1Q96HL8 342 aaPredicted RBP9.55□□□□□ -0.88
MSH2-202ENST00000406134 NEURL2Q9BR09 285 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 HERC2P3Q9BVR0 1158 aa9.55□□□□□ -0.88
MSH2-202ENST00000406134 DGCR6LQ9BY27 220 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms