RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 PRPS1L1P21108 318 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CCR3P51677 355 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CCL23P55773 120 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 C21orf58P58505 322 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 ISL1P61371 349 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 VAC14Q08AM6 782 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 LAPTM5Q13571 262 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 MOGQ16653 247 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CTU2Q2VPK5 515 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 SPOUT1Q5T280 376 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 FRG2Q64ET8 278 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 Q6ZNX1 250 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 DCP2Q8IU60 420 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 HS3ST5Q8IZT8 346 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 MTFMTQ96DP5 389 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 FRG2BQ96QU4 278 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 INPP5KQ9BT40 448 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 EMILIN2Q9BXX0 1053 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 LHPPQ9H008 270 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 TBC1D23Q9NUY8 699 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 PSME2Q9UL46 239 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 TMX2-CTNND1H3BSU7 103 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 HTR1AP08908 422 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 C1SP09871 688 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 PFKLP17858 780 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 ITIH1P19827 911 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 MAP4P27816 1152 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 GABRR2P28476 465 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 SPINT3P49223 89 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CSTF3Q12996 717 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 KCNC3Q14003 757 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 C16orf72Q14CZ0 275 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 PTCHD3Q3KNS1 767 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 CES5AQ6NT32 575 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 NEK5Q6P3R8 708 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 GAREM2Q75VX8 874 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 TMEM179BQ7Z7N9 219 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 RBM23Q86U06 439 aaKnown RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 C10orf111Q8N326 155 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 MUL1Q969V5 352 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 ZNF689Q96CS4 500 aaPredicted RBP11.06□□□□□ -0.64
C4orf3-201ENST00000399075 TSSK3Q96PN8 268 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 IRF2BPLQ9H1B7 796 aa11.06□□□□□ -0.64
C4orf3-201ENST00000399075 RFXANKO14593 260 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 HS6ST1O60243 411 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 POP4O95707 220 aaKnown RBP11.05□□□□□ -0.64
C4orf3-201ENST00000399075 JUPP14923 745 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 CD247P20963 164 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 TACR1P25103 407 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 KIR3DL1P43629 444 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 CYP4F8P98187 520 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 CREMQ03060 361 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 SRSF11Q05519 484 aaKnown RBP11.05□□□□□ -0.64
C4orf3-201ENST00000399075 MEP1AQ16819 746 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 DUOXA1Q1HG43 343 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 CPZQ66K79 652 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 LAIR2Q6ISS4 152 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 ERICH5Q6P6B1 374 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 TMC8Q8IU68 726 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 TTC16Q8NEE8 873 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 TANKQ92844 425 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 FBXL8Q96CD0 374 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 METTL2AQ96IZ6 378 aaKnown RBP11.05□□□□□ -0.64
C4orf3-201ENST00000399075 TRIT1Q9H3H1 467 aaKnown RBP11.05□□□□□ -0.64
C4orf3-201ENST00000399075 THG1LQ9NWX6 298 aaKnown RBP11.05□□□□□ -0.64
C4orf3-201ENST00000399075 SPG21Q9NZD8 308 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 TMPRSS11EQ9UL52 423 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 ERVW-1Q9UQF0 538 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 PCDHGB1Q9Y5G3 927 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 HSPE1-MOB4S4R3N1 261 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 TRAV19A0A0A6YYK7 116 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 EVPLLA8MZ36 301 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 M0QX08 132 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 SLC1A7O00341 560 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 AP2A2O94973 939 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 ATP1B2P14415 290 aaPredicted RBP11.05□□□□□ -0.64
C4orf3-201ENST00000399075 LAG3P18627 525 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 CDKN2CP42773 168 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 CTSOP43234 321 aaPredicted RBP11.05□□□□□ -0.64
C4orf3-201ENST00000399075 STK19P49842 368 aaPredicted RBP11.05□□□□□ -0.64
C4orf3-201ENST00000399075 HSPA14Q0VDF9 509 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 PGS1Q32NB8 556 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 CARD16Q5EG05 197 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 LIPJQ5W064 366 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 NOXRED1Q6NXP6 359 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 CNKSR3Q6P9H4 555 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 DEFB128Q7Z7B8 93 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 ZDHHC21Q8IVQ6 265 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 SETD9Q8NE22 299 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 ANKK1Q8NFD2 765 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 MCOLN3Q8TDD5 553 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 HSPBAP1Q96EW2 488 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 APIPQ96GX9 242 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 BCL7BQ9BQE9 202 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 BRD9Q9H8M2 597 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 TM9SF3Q9HD45 589 aa11.05□□□□□ -0.64
C4orf3-201ENST00000399075 SEMG1P04279 462 aa11.04□□□□□ -0.64
C4orf3-201ENST00000399075 PLA2G16P53816 162 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms