RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 HCN2Q9UL51 889 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 TOGARAM1Q9Y4F4 1720 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 KHKP50053 298 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 MTPNP58546 118 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 DPYSQ14117 519 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 FAM174BQ3ZCQ3 159 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 MS4A13Q5J8X5 152 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 RBM15BQ8NDT2 890 aaKnown RBP13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 TMEM40Q8WWA1 233 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 METTL7AQ9H8H3 244 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 TBC1D24Q9ULP9 559 aa13.91□□□□□ -0.18
PCDHA11-201ENST00000398640 MBLAC1A4D2B0 266 aaPredicted RBP13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 CAPZA1P52907 286 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 HNRNPDQ14103 355 aaKnown RBP13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 KLHDC9Q8NEP7 349 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 OR6K6Q8NGW6 343 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 S100ZQ8WXG8 99 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 IFT46Q9NQC8 304 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 FTSJ1Q9UET6 329 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 COQ4Q9Y3A0 265 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 WASF2Q9Y6W5 498 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 CAPN14A8MX76 684 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 ESR1P03372 595 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 VIPR1P32241 457 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 TXNL4AP83876 142 aaKnown RBP13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 CHAF1BQ13112 559 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 AMIGO1Q86WK6 493 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 LRTOMTQ8WZ04 291 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 NTAN1Q96AB6 310 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 COPS4Q9BT78 406 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 COMMD4Q9H0A8 199 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 SERINC1Q9NRX5 453 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 TAC3Q9UHF0 121 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 DKKL1Q9UK85 242 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 CDC7O00311 574 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 NOBOXO60393 691 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 ALPPP05187 535 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 HEXBP07686 556 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 NDUFS1P28331 727 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 BCAP31P51572 246 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 C5orf22Q49AR2 442 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 PTCRAQ6ISU1 281 aaPredicted RBP13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 CRELD1Q96HD1 420 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 CCDC28BQ9BUN5 200 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 FAM227AF5H4B4 570 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 PMM2O15305 246 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 GSC2O15499 205 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 PI15O43692 258 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 INMTO95050 263 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 PAPSS2O95340 614 aaPredicted RBP13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 SLC6A9P48067 706 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 MYLK3Q32MK0 819 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 ALG1LQ6GMV1 187 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 AAGABQ6PD74 315 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 FSTL5Q8N475 847 aaPredicted RBP13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 MAPK15Q8TD08 544 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 DIRAS2Q96HU8 199 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 SLC32A1Q9H598 525 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 BRD7Q9NPI1 651 aa13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 AJAP1Q9UKB5 411 aaPredicted RBP13.9□□□□□ -0.18
PCDHA11-201ENST00000398640 ANKRD36CQ5JPF3 1778 aa13.9□□□□□ -0.19
PCDHA11-201ENST00000398640 H0YGN5 161 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 GADD45GO95257 159 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 THRBP10828 461 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 GNAZP19086 355 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CCNOP22674 350 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 ACVRL1P37023 503 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CCSAPQ6IQ19 270 aaPredicted RBP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CHCHD6Q9BRQ6 235 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 TVP23BQ9NYZ1 205 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CALML5Q9NZT1 146 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 WBP11Q9Y2W2 641 aaKnown RBP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 A0A0X1KG70 313 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 OLR1P78380 273 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 CREB5Q02930 508 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 COL9A2Q14055 689 aaPredicted RBP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 PRRT3Q5FWE3 981 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 ADGRD1Q6QNK2 874 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 OR2AP1Q8NGE2 309 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 OR5AK3PQ8NH89 298 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 PCDH19Q8TAB3 1148 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 GPR174Q9BXC1 333 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 C1orf109Q9NX04 203 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 A0A1W2PRG6 482 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 ELOA3DA6NLF2 546 aaPredicted RBP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 SHOX2O60902 331 aaPredicted RBP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 ALDH3A2P51648 485 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 TARDBPQ13148 414 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 GPR68Q15743 365 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC5A9Q2M3M2 681 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 ELOA3BQ3SY89 546 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 THAP5Q7Z6K1 395 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 ELOA3Q8NG57 546 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 GIPC3Q8TF64 312 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 HS3ST4Q9Y661 456 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 IGKV6-21A0A0C4DH24 114 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 FAM172BPA6NC97 362 aa13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 ERI3O43414 337 aaKnown RBP13.89□□□□□ -0.19
PCDHA11-201ENST00000398640 PCDH7O60245 1069 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms