RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 SOX14O95416 240 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 PRSS56P0CW18 603 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 PRPS1L1P21108 318 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 HOXA11P31270 313 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 STAT5AP42229 794 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 OR4D2P58180 307 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 ADGRF1Q5T601 910 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 PLPP4Q5VZY2 271 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF773Q6PK81 442 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 MAMDC4Q6UXC1 1216 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 PRR23BQ6ZRT6 265 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 CHST9Q7L1S5 443 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 GALNT10Q86SR1 603 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 KBTBD6Q86V97 674 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 FUBP3Q96I24 572 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 MRGPRX2Q96LB1 330 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 BRINP2Q9C0B6 783 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 C3orf14Q9HBI5 128 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 CCDC177Q9NQR7 707 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 RHCGQ9UBD6 479 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 A8MV72 311 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 C1QTNF3-AMACRE9PGA6 284 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 GMFGO60234 142 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 POP4O95707 220 aaKnown RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 PFKMP08237 780 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 DNAJA1P31689 397 aaKnown RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 OR2B6P58173 313 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 C1QTNF8P60827 252 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 MOGQ16653 247 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 NDUFA5Q16718 116 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF423Q2M1K9 1284 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 TPRG1LQ5T0D9 272 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 KIAA1324Q6UXG2 1013 aaKnown RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 KCNN1Q92952 543 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 SCLYQ96I15 445 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 BARD1Q99728 777 aaKnown RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 GINS4Q9BRT9 223 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 C20orf27Q9GZN8 174 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 SMOC2Q9H3U7 446 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 GABRQQ9UN88 632 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 A0A1W2PRB8 838 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 ARHGEF33A8MVX0 844 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 H3BNH8 94 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 ZW10O43264 779 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 ABCB7O75027 752 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 IFI30P13284 250 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF10P21506 573 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 RPL10P27635 214 aaKnown RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 CTNNB1P35222 781 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 OR1E2P47887 323 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 FAM189BP81408 668 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 NIPAL4Q0D2K0 466 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 TEAD4Q15561 434 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 IQCCQ4KMZ1 466 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 OR4K1Q8NGD4 311 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 OR52B6Q8NGF0 335 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 TMEM40Q8WWA1 233 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 ZCCHC3Q9NUD5 404 aaKnown RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 CCM2LQ9NUG4 571 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-204ENST00000397545 RIMKLBQ9ULI2 386 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 DNAJC15Q9Y5T4 150 aa10.49□□□□□ -0.73
CCDC40-204ENST00000397545 SYN3O14994 580 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 SCN2BO60939 215 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 CTSEP14091 401 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 MAP2K4P45985 399 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 CDKN2DP55273 166 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 ZNHIT3Q15649 155 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 LDLRAD1Q5T700 205 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 OGFRL1Q5TC84 451 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 GDF6Q6KF10 455 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 MEIOBQ8N635 442 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 KRTCAP2Q8N6L1 136 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 KDM1BQ8NB78 822 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 KLK6Q92876 244 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TPT1P8Q9HAU6 139 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 UCKL1Q9NWZ5 548 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 THUMPD1Q9NXG2 353 aaKnown RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 ZCWPW2A0A1B0GU75 182 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 UBE2QL1A1L167 161 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 CSF2P04141 144 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 ANXA8P13928 327 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 HOXB6P17509 224 aaKnown RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 AMD1P17707 334 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 AKR1D1P51857 326 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PSMD4P55036 377 aaKnown RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PLEKHG6Q3KR16 790 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PDCD4Q53EL6 469 aaKnown RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PIGGQ5H8A4 983 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 CRB2Q5IJ48 1285 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 KIAA1161Q6NSJ0 714 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF557Q8N988 423 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 OR8D1Q8WZ84 308 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 GATA6Q92908 595 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 OR2AG1Q9H205 316 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 SLC32A1Q9H598 525 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 CREBZFQ9NS37 354 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 FLRT1Q9NZU1 646 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PTBP2Q9UKA9 531 aaKnown RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 IKZF2Q9UKS7 526 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 CFAP20Q9Y6A4 193 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms