RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 IL12RB1P42701 662 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 CBX5P45973 191 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 POLR2JP52435 117 aaKnown RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 ERVPABLB-1P60509 514 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 ABRAXAS2Q15018 415 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 ACOX1Q15067 660 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 TRIP4Q15650 581 aaPredicted RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 ZNF404Q494X3 552 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 ATP6AP1LQ52LC2 224 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 C6orf141Q5SZD1 244 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 LCN8Q6JVE9 175 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 BLOC1S3Q6QNY0 202 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 GPSM1Q86YR5 675 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 PHYKPLQ8IUZ5 450 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 FAM126BQ8IXS8 530 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 PHACTR4Q8IZ21 702 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 CLEC4FQ8N1N0 589 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 ZNF555Q8NEP9 628 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 SLC22A17Q8WUG5 538 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 AUTS2Q8WXX7 1259 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 DACT3Q96B18 629 aaPredicted RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 ROPN1LQ96C74 230 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 ZHX1-C8orf76Q96EF9 292 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 AURKBQ96GD4 344 aaPredicted RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 SCLYQ96I15 445 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 BDH2Q9BUT1 245 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 THUMPD3Q9BV44 507 aaKnown RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 CIPCQ9C0C6 399 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 SLIRPQ9GZT3 109 aaKnown RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 EPS8L2Q9H6S3 715 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 SCPEP1Q9HB40 452 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 LATS2Q9NRM7 1088 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 TAS2R9Q9NYW1 312 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 ACTR3BQ9P1U1 418 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 ANAPC2Q9UJX6 822 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 AGO1Q9UL18 857 aaKnown RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 BTBD3Q9Y2F9 522 aa4.9□□□□□ -1.63
SSR1-202ENST00000397511 OAS3Q9Y6K5 1087 aaKnown RBP4.9□□□□□ -1.63
SSR1-202ENST00000397511 HMX3A6NHT5 357 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ANKRD66B4E2M5 251 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 CTDSP2O14595 271 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 KERAO60938 352 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ZNF780AO75290 641 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 VPS26AO75436 327 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 OAZ2O95190 189 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 LRATO95237 230 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PAPSS2O95340 614 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 VNN2O95498 520 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 C1QCP02747 245 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 HTR1AP08908 422 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 THRBP10828 461 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PSKH1P11801 424 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SLC2A4P14672 509 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 HLA-DPA1P20036 260 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 EFNA1P20827 205 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 WEE1P30291 646 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ATP5C1P36542 298 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 TSPAN7P41732 249 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 POLD2P49005 469 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ETV1P50549 477 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 IL2P60568 153 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 RPL38P63173 70 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 SMARCB1Q12824 385 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 EPS8Q12929 822 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PLD1Q13393 1074 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TMEM95Q3KNT9 176 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PARP15Q460N3 678 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TOR2AQ5JU69 321 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 CTSL3PQ5NE16 218 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 C6orf136Q5SQH8 315 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 CLVS2Q5SYC1 327 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 KANK2Q63ZY3 851 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GLYATQ6IB77 296 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 METTL2BQ6P1Q9 378 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 XKRXQ6PP77 449 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ZNF517Q6ZMY9 492 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 TPGS1Q6ZTW0 290 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 DEFB128Q7Z7B8 93 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GALNT10Q86SR1 603 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 STK32CQ86UX6 486 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 RAB43Q86YS6 212 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 HID1Q8IV36 788 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PLPP6Q8IY26 295 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 RNF175Q8N4F7 328 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GALNT11Q8NCW6 608 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 OR10Z1Q8NGY1 313 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 CDC26Q8NHZ8 85 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PROKR1Q8TCW9 393 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SOCS4Q8WXH5 440 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 MYLIPQ8WY64 445 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PYCR2Q96C36 320 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 REXO5Q96IC2 774 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 PHOX2BQ99453 314 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 APOL4Q9BPW4 351 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GPR63Q9BZJ6 419 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 C6orf62Q9GZU0 229 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 NUAK2Q9H093 628 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TNKS2Q9H2K2 1166 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ITM2CQ9NQX7 267 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SDR39U1Q9NRG7 319 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms