RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TMEM126BQ8IUX1 230 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 UBLCP1Q8WVY7 318 aaPredicted RBP20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 ATL1Q8WXF7 558 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 ZUFSPQ96AP4 578 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 FCRL4Q96PJ5 515 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 DPH7Q9BTV6 452 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 SPRY4Q9C004 299 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 A0A087X1B8 175 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 TEX51A0A1B0GUA7 166 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 TARM1B6A8C7 271 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 NRP2O60462 931 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 SCRG1O75711 98 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 KRT38O76015 456 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 C2P06681 752 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 ITPKBP27987 946 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 TYK2P29597 1187 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 CSRP3P50461 194 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 ITGA1P56199 1179 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 PRDX1Q06830 199 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 DLG1Q12959 904 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 ERCC6LQ2NKX8 1250 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 TIPARPQ7Z3E1 657 aaKnown RBP20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 PTERQ96BW5 349 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 EGFL8Q99944 293 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 DHRS4Q9BTZ2 278 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 SERTAD3Q9UJW9 196 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 TLK1Q9UKI8 766 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 PLCL2Q9UPR0 1127 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 ACOT9Q9Y305 439 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 KLK4Q9Y5K2 254 aa20.36■□□□□ 0.85
TSPAN4-206ENST00000397408 A0A096LPK6 155 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 IGKV1-8A0A0C4DH67 115 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 ANXA5P08758 320 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 LTA4HP09960 611 aaKnown RBP20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 CCND1P24385 295 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 CNTFP26441 200 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 GCAP28676 217 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 SLC26A3P40879 764 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 ATP1A2P50993 1020 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 ABATP80404 500 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 CDKL1Q00532 357 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 IRF9Q00978 393 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 OR4D1Q15615 310 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 ZXDCQ2QGD7 858 aaPredicted RBP20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 PRAMEF17Q5VTA0 474 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 CAPN13Q6MZZ7 669 aaPredicted RBP20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 WDR93Q6P2C0 686 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 CCDC91Q7Z6B0 441 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 GPR135Q8IZ08 494 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 CACNA2D3Q8IZS8 1091 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 NLGN4XQ8N0W4 816 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 GALNT6Q8NCL4 622 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 NLGN4YQ8NFZ3 816 aaPredicted RBP20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 OR56A3Q8NH54 315 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 KCTD4Q8WVF5 259 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 KIAA1191Q96A73 305 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 PYCR2Q96C36 320 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 SGPP1Q9BX95 441 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 PCBD2Q9H0N5 130 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 IGSF5Q9NSI5 407 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 IRAK4Q9NWZ3 460 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 ANKMY1Q9P2S6 941 aa20.35■□□□□ 0.85
TSPAN4-206ENST00000397408 HEATR5BQ9P2D3 2071 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 OR2A25A4D2G3 310 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 NCF1BA6NI72 391 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 NCF1CA8MVU1 366 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 TRIM49D1C9J1S8 452 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 E7EQ34 232 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 CTSVO60911 334 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 CPNE3O75131 537 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 OR2B3O76000 313 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 NTRK1P04629 796 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 CTSBP07858 339 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 NCF1P14598 390 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 TFEBP19484 476 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 TLE3Q04726 772 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 TGFBIQ15582 683 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 ZC3H12BQ5HYM0 836 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 ADCK2Q7Z695 626 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 GPSM1Q86YR5 675 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 MCATQ8IVS2 390 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 CENPLQ8N0S6 344 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 IL22RA1Q8N6P7 574 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 NKD1Q969G9 470 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 ISL2Q96A47 359 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 PLCD4Q9BRC7 762 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 VPS11Q9H270 941 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 ALG9Q9H6U8 611 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 NMRAL1Q9HBL8 299 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 CUEDC1Q9NWM3 386 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 EURLQ9NYK6 297 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 RNF112Q9ULX5 631 aa20.34■□□□□ 0.85
TSPAN4-206ENST00000397408 KRT37O76014 449 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 MAGEA12P43365 314 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 BROXQ5VW32 411 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 ZNF425Q6IV72 752 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 C6orf15Q6UXA7 325 aaPredicted RBP20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 VASH2Q86V25 355 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 PAQR7Q86WK9 346 aa20.33■□□□□ 0.84
TSPAN4-206ENST00000397408 ESX1Q8N693 406 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms