RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TROVE2P10155 538 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEC13-209ENST00000397117 AK4P27144 223 aaPredicted RBP12.83□□□□□ -0.36
SEC13-209ENST00000397117 HSPA7P48741 367 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.83□□□□□ -0.36
SEC13-209ENST00000397117 GUSBP11Q6P575 273 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 EFL1Q7Z2Z2 1120 aaKnown RBP12.83□□□□□ -0.36
SEC13-209ENST00000397117 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 PHACTR4Q8IZ21 702 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 UBTD2Q8WUN7 234 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 C12orf66Q96MD2 445 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 ELAC2Q9BQ52 826 aaKnown RBP12.83□□□□□ -0.36
SEC13-209ENST00000397117 C1QTNF3Q9BXJ4 246 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 GSDMCQ9BYG8 508 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 CD244Q9BZW8 370 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 C20orf27Q9GZN8 174 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 GSTO2Q9H4Y5 243 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 PRDM8Q9NQV8 689 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 HEBP2Q9Y5Z4 205 aa12.83□□□□□ -0.36
SEC13-209ENST00000397117 CFAP20Q9Y6A4 193 aaKnown RBP12.83□□□□□ -0.36
SEC13-209ENST00000397117 PMS2P1A4D2B8 440 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 PRR19A6NJB7 356 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 PYCARD-AS1I3L0S3 204 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 TAPBPO15533 448 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 CCNT2O60583 730 aaKnown RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 STK16O75716 305 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 CHRNGP07510 517 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 RPS17P08708 135 aaKnown RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 KITP10721 976 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 JUNDP17535 347 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 CDH13P55290 713 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 KCNC4Q03721 635 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 PRKAA1Q13131 559 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 PCBP2Q15366 365 aaKnown RBP eCLIP12.82□□□□□ -0.363e-9■■■■■ 55.9
SEC13-209ENST00000397117 RBBP7Q16576 425 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 C18orf21Q32NC0 220 aaPredicted RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 GKAP1Q5VSY0 366 aaPredicted RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 KIAA1614Q5VZ46 1190 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 CAPRIN2Q6IMN6 1127 aaKnown RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 METTL2BQ6P1Q9 378 aaKnown RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 RPS27LQ71UM5 84 aaKnown RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 PHC3Q8NDX5 983 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 OR5AR1Q8NGP9 310 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 OR9A1PQ8NGU1 263 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 OR5K2Q8NHB8 316 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 ESAMQ96AP7 390 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 RAD51AP1Q96B01 352 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 FBXL8Q96CD0 374 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 FERD3LQ96RJ6 166 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 SORT1Q99523 831 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 PKP4Q99569 1192 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 HGH1Q9BTY7 390 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 TRIM55Q9BYV6 548 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 IMP3Q9NV31 184 aaKnown RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 OPTCQ9UBM4 332 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 TBC1D29Q9UFV1 150 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 APOBEC3BQ9UH17 382 aaKnown RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 PCTPQ9UKL6 214 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 WDR37Q9Y2I8 494 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 TDRKHQ9Y2W6 561 aaKnown RBP12.82□□□□□ -0.36
SEC13-209ENST00000397117 RAP2CQ9Y3L5 183 aa12.82□□□□□ -0.36
SEC13-209ENST00000397117 PTPN13Q12923 2485 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 MYO1CO00159 1063 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 AQP9O43315 295 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 WISP1O95388 367 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 TGDSO95455 350 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 MLYCDO95822 493 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 ARRB2P32121 409 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 GGT5P36269 586 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 CCR10P46092 362 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 PIK3CGP48736 1102 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 CLCQ05315 142 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 GALNT1Q10472 559 aaPredicted RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 LCP2Q13094 533 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 CLCA4Q14CN2 919 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 CCSMST1Q4G0I0 132 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 PERM1Q5SV97 790 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 WASH2PQ6VEQ5 465 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 SPATA21Q7Z572 469 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 TAF8Q7Z7C8 310 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 TBC1D21Q8IYX1 336 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 KIRREL3Q8IZU9 778 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 AFAP1L2Q8N4X5 818 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 CCL4L1Q8NHW4 92 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 PIWIL2Q8TC59 973 aaKnown RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 GPBAR1Q8TDU6 330 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 TRPC4APQ8TEL6 797 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 ZNF483Q8TF39 744 aaPredicted RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 ZNF473Q8WTR7 871 aaKnown RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 INSM2Q96T92 566 aaPredicted RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 TMEM79Q9BSE2 394 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 SHCBP1LQ9BZQ2 653 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 TCEAL2Q9H3H9 227 aaPredicted RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 NPHS2Q9NP85 383 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 SEMA4BQ9NPR2 832 aaPredicted RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 WASH6PQ9NQA3 447 aa12.81□□□□□ -0.36
SEC13-209ENST00000397117 STOX2Q9P2F5 926 aaPredicted RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 MARCOQ9UEW3 520 aaPredicted RBP12.81□□□□□ -0.36
SEC13-209ENST00000397117 CIDEBQ9UHD4 219 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms