RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RERGLQ9H628 205 aa15.43■□□□□ 0.06
SMARCD1-202ENST00000394963 EQTNQ9NQ60 294 aa15.43■□□□□ 0.06
SMARCD1-202ENST00000394963 CCDC177Q9NQR7 707 aaPredicted RBP15.43■□□□□ 0.06
SMARCD1-202ENST00000394963 ELOVL7A1L3X0 281 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 CARNS1A5YM72 827 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 BBIP1A8MTZ0 92 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 DEAF1O75398 565 aaPredicted RBP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 MOSPD3O75425 235 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 DDX6P26196 483 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 HERC3Q15034 1050 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 ENPP7Q6UWV6 458 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 CYHR1Q6ZMK1 362 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 MACC1Q6ZN28 852 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 ZNF761Q86XN6 746 aaPredicted RBP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 DHRSXQ8N5I4 330 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 OTULINQ96BN8 352 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 LRRC3Q9BY71 257 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 WDR26Q9H7D7 661 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 PCDHGB5Q9Y5G0 923 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 STON1Q9Y6Q2 735 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 GSAPA4D1B5 854 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 GAPDHSO14556 408 aaPredicted RBP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 SNUPNO95149 360 aaKnown RBP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 HNRNPA1P09651 372 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 EBLN1P0CF75 366 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 PTNP21246 168 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 AOAHP28039 575 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 IL5RAQ01344 420 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 EMX2Q04743 252 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 C17orf64Q86WR6 236 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 PDSS2Q86YH6 399 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 KIAA2013Q8IYS2 634 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 RELTQ969Z4 430 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 ROPN1LQ96C74 230 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 YBX2Q9Y2T7 364 aaKnown RBP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 RWDD3Q9Y3V2 267 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 LILRB3O75022 631 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 CDKL1Q00532 357 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 CAMK1Q14012 370 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 HNRNPA1L2Q32P51 320 aaKnown RBP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 ALG1LQ6GMV1 187 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 NOXRED1Q6NXP6 359 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 CHSY3Q70JA7 882 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 OR4A15Q8NGL6 344 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 YIPF2Q9BWQ6 316 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 ROGDIQ9GZN7 287 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 SMURF2Q9HAU4 748 aa15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 PTBP2Q9UKA9 531 aaKnown RBP15.42■□□□□ 0.06
SMARCD1-202ENST00000394963 TPST2O60704 377 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 OLFM2O95897 454 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 ASGR2P07307 311 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 HOXB2P14652 356 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 MED27Q6P2C8 311 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 TNFAIP8L2Q6P589 184 aaPredicted RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 HERVK_113Q902F9 699 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 RMND5BQ96G75 393 aaPredicted RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 RAB23Q9ULC3 237 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 FAF1Q9UNN5 650 aaPredicted RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 PLEKHM1Q9Y4G2 1056 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 PCDH7O60245 1069 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 TNFRSF1BP20333 461 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 RPS26P62854 115 aaKnown RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 PON2Q15165 354 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 ARTNQ5T4W7 220 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 PDE12Q6L8Q7 609 aaKnown RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 ZNF614Q8N883 585 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 HUS1BQ8NHY5 278 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 FGF14Q92915 247 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 FATE1Q969F0 183 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 TADA1Q96BN2 335 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 MAELQ96JY0 434 aaKnown RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 DGCR6LQ9BY27 220 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 HEBP1Q9NRV9 189 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 RASSF1Q9NS23 344 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 KLHL3Q9UH77 587 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 DOLKQ9UPQ8 538 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 A0A1W2PQU0 124 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 LSM1O15116 133 aaKnown RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 ENGP17813 658 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 RAB8AP61006 207 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 ENPP6Q6UWR7 440 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 SMYD1Q8NB12 490 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 UTP15Q8TED0 518 aaKnown RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 PHF12Q96QT6 1004 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 SYNDIG1Q9H7V2 258 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 AMBNQ9NP70 447 aa15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 STOX2Q9P2F5 926 aaPredicted RBP15.41■□□□□ 0.06
SMARCD1-202ENST00000394963 THSD7BQ9C0I4 1608 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SOCS2O14508 198 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ZSCAN9O15535 394 aaPredicted RBP15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 C8orf89P0DMQ9 161 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 INHBCP55103 352 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 PRKCQQ04759 706 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SLC14A2Q15849 920 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 CYP2A13Q16696 494 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 CCNYL2Q5T2Q4 361 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 RAB42Q8N4Z0 105 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 OR4E2Q8NGC2 313 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SLC47A1Q96FL8 570 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SIPA1Q96FS4 1042 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms