RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 ZNF423Q2M1K9 1284 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 PYCR3Q53H96 274 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 COQ5Q5HYK3 327 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 CAPRIN2Q6IMN6 1127 aaKnown RBP12.18□□□□□ -0.46
SSH2-203ENST00000394848 GRHL2Q6ISB3 625 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 SLCO4C1Q6ZQN7 724 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 TRIM69Q86WT6 500 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 C1orf210Q8IVY1 113 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 LRRC56Q8IYG6 542 aaPredicted RBP12.18□□□□□ -0.46
SSH2-203ENST00000394848 LMNTD1Q8N9Z9 388 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 OR5K2Q8NHB8 316 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 SETD7Q8WTS6 366 aaKnown RBP12.18□□□□□ -0.46
SSH2-203ENST00000394848 NEIL2Q969S2 332 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 VPS33AQ96AX1 596 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 HOPXQ9BPY8 73 aaPredicted RBP12.18□□□□□ -0.46
SSH2-203ENST00000394848 TIMM29Q9BSF4 260 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 OSGEPL1Q9H4B0 414 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 SGK2Q9HBY8 427 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 MRPL40Q9NQ50 206 aaKnown RBP12.18□□□□□ -0.46
SSH2-203ENST00000394848 PRMT8Q9NR22 394 aaPredicted RBP12.18□□□□□ -0.46
SSH2-203ENST00000394848 GID8Q9NWU2 228 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 USP36Q9P275 1121 aaKnown RBP12.18□□□□□ -0.46
SSH2-203ENST00000394848 SUFUQ9UMX1 484 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 DYRK1BQ9Y463 629 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 PCDHGA11Q9Y5H2 935 aa12.18□□□□□ -0.46
SSH2-203ENST00000394848 CFAP20Q9Y6A4 193 aaKnown RBP12.18□□□□□ -0.46
SSH2-203ENST00000394848 H0YIV9 168 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 ANKRD28O15084 1053 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 ME2P23368 584 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 AVPR2P30518 371 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 ERFP50548 548 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 THOP1P52888 689 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 KIAA0040Q15053 153 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 TMEM31Q5JXX7 168 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 C8orf82Q6P1X6 216 aaPredicted RBP12.17□□□□□ -0.46
SSH2-203ENST00000394848 SUSD1Q6UWL2 747 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 LIX1Q8N485 282 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 RNF148Q8N7C7 305 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 DTWD2Q8NBA8 298 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 DENND6BQ8NEG7 585 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 WDR20Q8TBZ3 569 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 CMTM7Q96FZ5 175 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 SCARF2Q96GP6 870 aaPredicted RBP12.17□□□□□ -0.46
SSH2-203ENST00000394848 IL17FQ96PD4 163 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 TRIT1Q9H3H1 467 aaKnown RBP12.17□□□□□ -0.46
SSH2-203ENST00000394848 ACTL8Q9H568 366 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 IL1RL2Q9HB29 575 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 SPAG4Q9NPE6 437 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 CCDC177Q9NQR7 707 aaPredicted RBP12.17□□□□□ -0.46
SSH2-203ENST00000394848 ASIC5Q9NY37 505 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 PLAGL1Q9UM63 463 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 KCNK6Q9Y257 313 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 PLEKHM1Q9Y4G2 1056 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 TRPM6Q9BX84 2022 aa12.17□□□□□ -0.46
SSH2-203ENST00000394848 CCDC163A0A0D9SF12 145 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 DYTNA2CJ06 578 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 LAMTOR5O43504 91 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 LATO43561 262 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 GPR37L1O60883 481 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 ZNF217O75362 1048 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 C1GALT1C1LP0DN25 315 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 TDGF1P13385 188 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 HNRNPA2B1P22626 353 aaKnown RBP12.16□□□□□ -0.46
SSH2-203ENST00000394848 JAK1P23458 1154 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 PRPH2P23942 346 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 VARSP26640 1264 aaKnown RBP12.16□□□□□ -0.46
SSH2-203ENST00000394848 MSX2P35548 267 aaPredicted RBP12.16□□□□□ -0.46
SSH2-203ENST00000394848 HSD17B2P37059 387 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 CSTF3Q12996 717 aaKnown RBP12.16□□□□□ -0.46
SSH2-203ENST00000394848 ARHGAP19Q14CB8 494 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 RCN1Q15293 331 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 THEMIS2Q5TEJ8 643 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 TBC1D21Q8IYX1 336 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 MAML2Q8IZL2 1156 aaPredicted RBP12.16□□□□□ -0.46
SSH2-203ENST00000394848 MINDY1Q8N5J2 469 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 BMFQ96LC9 184 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 FERD3LQ96RJ6 166 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 INSM2Q96T92 566 aaPredicted RBP12.16□□□□□ -0.46
SSH2-203ENST00000394848 MTERF1Q99551 399 aaKnown RBP12.16□□□□□ -0.46
SSH2-203ENST00000394848 ZBTB18Q99592 522 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 TMEM181Q9P2C4 612 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 LEF1Q9UJU2 399 aaPredicted RBP12.16□□□□□ -0.46
SSH2-203ENST00000394848 WDR37Q9Y2I8 494 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 CUL9Q8IWT3 2517 aa12.16□□□□□ -0.46
SSH2-203ENST00000394848 PRR33A8MZF0 331 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 NPIPB8E9PQR5 432 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 TRIM38O00635 465 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 FKBP6O75344 327 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 EEDO75530 441 aaKnown RBP12.15□□□□□ -0.46
SSH2-203ENST00000394848 SEMA4FO95754 770 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 BCKDHAP12694 445 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 XRCC1P18887 633 aaPredicted RBP12.15□□□□□ -0.46
SSH2-203ENST00000394848 IDSP22304 550 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 KIAA1024LP59773 190 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 DDX39BQ13838 428 aaKnown RBP12.15□□□□□ -0.46
SSH2-203ENST00000394848 CCNIQ14094 377 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 E2F2Q14209 437 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 PTGR1Q14914 329 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 TLR1Q15399 786 aa12.15□□□□□ -0.46
SSH2-203ENST00000394848 TIGD2Q4W5G0 525 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms