RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 BEND7Q8N7W2 519 aaPredicted RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 KBTBD8Q8NFY9 601 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 TRIB2Q92519 343 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 CLP1Q92989 425 aaKnown RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 KLHL3Q9UH77 587 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 ZNF225Q9UK10 706 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 SLC45A1Q9Y2W3 748 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 KCNE2Q9Y6J6 123 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 TAF4O00268 1085 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 STC2O76061 302 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 FPR1P21462 350 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 KDELR2P33947 212 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 HNF1BP35680 557 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 DSC3Q14574 896 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 CASP12Q6UXS9 341 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 DLEU7Q6UYE1 221 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 EIF3MQ7L2H7 374 aaKnown RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 GPR65Q8IYL9 337 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 C1orf52Q8N6N3 182 aaKnown RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 MCMBPQ9BTE3 642 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 EMILIN2Q9BXX0 1053 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 BRINP2Q9C0B6 783 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 PAK1IP1Q9NWT1 392 aaPredicted RBP15.7■□□□□ 0.1
PCDH1-203ENST00000394536 PRSS21Q9Y6M0 314 aa15.7■□□□□ 0.1
PCDH1-203ENST00000394536 OR10H3O60404 316 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 HMGCLP35914 325 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 CAMK2GQ13555 558 aaPredicted RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 CYP4Z1Q86W10 505 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 PTRH1Q86Y79 214 aaKnown RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 ALDH16A1Q8IZ83 802 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 VANGL1Q8TAA9 524 aaPredicted RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 CSGALNACT1Q8TDX6 532 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 SCAMP4Q969E2 229 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 APIPQ96GX9 242 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 CACYBPQ9HB71 228 aaKnown RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 IL26Q9NPH9 171 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 RHCGQ9UBD6 479 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 VPS29Q9UBQ0 182 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 TRIP12Q14669 1992 aaPredicted RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 DRGXA6NNA5 263 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 SMAD6O43541 496 aaKnown RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 IFNA14P01570 189 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 MAGEA10P43363 369 aaPredicted RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 CLCN4P51793 760 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 ALDH6A1Q02252 535 aaKnown RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 NOXRED1Q6NXP6 359 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 Q6ZPB1 254 aaPredicted RBP15.69■□□□□ 0.1
PCDH1-203ENST00000394536 ASZ1Q8WWH4 475 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 SCLYQ96I15 445 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 RDH12Q96NR8 316 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 AMBRA1Q9C0C7 1298 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 M0QX08 132 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 OR7A17O14581 309 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 TPST2O60704 377 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 PRPS1L1P21108 318 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 MAGEA11P43364 429 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 PLEKHG6Q3KR16 790 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 MORN1Q5T089 497 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 KIAA1614Q5VZ46 1190 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 LRRC66Q68CR7 880 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 PHYKPLQ8IUZ5 450 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 MTERF3Q96E29 417 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 TOR4AQ9NXH8 423 aa15.69■□□□□ 0.1
PCDH1-203ENST00000394536 ASPDHA6ND91 283 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 KRT20P35900 424 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 STK19P49842 368 aaPredicted RBP15.68■□□□□ 0.1
PCDH1-203ENST00000394536 ACLYP53396 1101 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 CYP4F8P98187 520 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 C2orf80Q0P641 193 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 SUSD1Q6UWL2 747 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 NANOGNBQ7Z5D8 188 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 BPIFB1Q8TDL5 484 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 DUS3LQ96G46 650 aaKnown RBP15.68■□□□□ 0.1
PCDH1-203ENST00000394536 DMRTB1Q96MA1 342 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 HEBP1Q9NRV9 189 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 TMA7Q9Y2S6 64 aaKnown RBP15.68■□□□□ 0.1
PCDH1-203ENST00000394536 RBBP6Q7Z6E9 1792 aaKnown RBP15.68■□□□□ 0.1
PCDH1-203ENST00000394536 M0R129 80 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 HOXA2O43364 376 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 LZTS3O60299 673 aaPredicted RBP15.68■□□□□ 0.1
PCDH1-203ENST00000394536 SGSHP51688 502 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 COPZ1P61923 177 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 LYPLAL1Q5VWZ2 237 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 DNAJB7Q7Z6W7 309 aaPredicted RBP15.68■□□□□ 0.1
PCDH1-203ENST00000394536 TRIM69Q86WT6 500 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 NXPE1Q8N323 547 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 OR10G2Q8NGC3 310 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 LKAAEAR1Q8TD35 194 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 HEPHQ9BQS7 1158 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 KCNH6Q9H252 994 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 CRISPLD1Q9H336 500 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 CTPS2Q9NRF8 586 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 DCAF13Q9NV06 445 aaKnown RBP15.68■□□□□ 0.1
PCDH1-203ENST00000394536 ABCG2Q9UNQ0 655 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 ZNF840PA6NDX5 716 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 PRR23AA6NEV1 266 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 B4GALT3O60512 393 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 TNNI3P19429 210 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 CD97P48960 835 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 SRSF11Q05519 484 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms