RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GSTA4O15217 222 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 NDUFA2O43678 99 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 CHMP24386 653 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 THPOP40225 353 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 NRIP1P48552 1158 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 MTPNP58546 118 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 OLR1P78380 273 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 YWHAHQ04917 246 aaPredicted RBP18.37■□□□□ 0.53
HOXC6-202ENST00000394331 DSC3Q14574 896 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 CPZQ66K79 652 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 C17orf99Q6UX52 265 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 ZNF782Q6ZMW2 699 aaPredicted RBP18.37■□□□□ 0.53
HOXC6-202ENST00000394331 AHSA2Q719I0 299 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 FAM181AQ8N9Y4 354 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 OR4M2Q8NGB6 313 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 REPS1Q96D71 796 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 FRMD6Q96NE9 622 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 RIBC2Q9H4K1 309 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 OSER1Q9NX31 292 aa18.37■□□□□ 0.53
HOXC6-202ENST00000394331 MITFO75030 526 aaPredicted RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 WBP4O75554 376 aaKnown RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 PAPSS2O95340 614 aaPredicted RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 TNFSF8P32971 234 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 KCNC1P48547 511 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 CD83Q01151 205 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 LCP2Q13094 533 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 SMN1Q16637 294 aaKnown RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 UMODL1-AS1Q8N2C9 162 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 IMP4Q96G21 291 aaKnown RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 CCDC120Q96HB5 630 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 FAM83DQ9H4H8 585 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 NMUR1Q9HB89 426 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 DCAF13Q9NV06 445 aaKnown RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 V9GYH0 126 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 A0A1W2PQH9 124 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 CD3EAPO15446 510 aaKnown RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 GRK5P34947 590 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 MAGEA2P43356 314 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 PGFP49763 221 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 SCN1BQ07699 218 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 HECTD2Q5U5R9 776 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 GPR149Q86SP6 731 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 YIPF7Q8N8F6 280 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 PROKR1Q8TCW9 393 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 ASB15Q8WXK1 588 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 MYDGFQ969H8 173 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 RNF121Q9H920 327 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 ATP13A1Q9HD20 1204 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 MYLKQ15746 1914 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 B4DXG7 233 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 ADORA3P0DMS8 318 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 ITGB6P18564 788 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 CPN2P22792 545 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 SIM2Q14190 667 aaPredicted RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 IRF3Q14653 427 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 MON1AQ86VX9 555 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 SCN4BQ8IWT1 228 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 PTGR2Q8N8N7 351 aaPredicted RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 TRPV1Q8NER1 839 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 ITCHQ96J02 903 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 ZNF578Q96N58 590 aaPredicted RBP18.36■□□□□ 0.53
HOXC6-202ENST00000394331 ADAM2Q99965 735 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 ATPIF1Q9UII2 106 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 PCDHB8Q9UN66 801 aa18.36■□□□□ 0.53
HOXC6-202ENST00000394331 RHOQP17081 205 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 BTBD16Q32M84 506 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 TIMM50Q3ZCQ8 353 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 MARC1Q5VT66 337 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 KIAA1614Q5VZ46 1190 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 DET1Q7L5Y6 550 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 RNF130Q86XS8 419 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 MAGEB10Q96LZ2 347 aaPredicted RBP18.35■□□□□ 0.53
HOXC6-202ENST00000394331 PPM1MQ96MI6 270 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 Q96MT0 163 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 COPS4Q9BT78 406 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 TMEM245Q9H330 911 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 SMURF1Q9HCE7 757 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 MIA3Q5JRA6 1907 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 MANSC4A6NHS7 340 aaPredicted RBP18.35■□□□□ 0.53
HOXC6-202ENST00000394331 PLD2O14939 933 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 PEX11BO96011 259 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 DNTTP04053 509 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 ATP6AP1LQ52LC2 224 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 ZBTB37Q5TC79 503 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 C19orf48Q6RUI8 117 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 TTC29Q8NA56 475 aaPredicted RBP18.35■□□□□ 0.53
HOXC6-202ENST00000394331 RHEBL1Q8TAI7 183 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 KCNA7Q96RP8 456 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 MCCC1Q96RQ3 725 aaPredicted RBP18.35■□□□□ 0.53
HOXC6-202ENST00000394331 SRRQ9GZT4 340 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 NT5MQ9NPB1 228 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 PSORS1C1Q9UIG5 152 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 UTS2RQ9UKP6 389 aa18.35■□□□□ 0.53
HOXC6-202ENST00000394331 ATP6V1G2-DDX39BF2Z307 99 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 SLC7A4O43246 635 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 ITGB1P05556 798 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 ETV1P50549 477 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 ITKQ08881 620 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 SNTA1Q13424 505 aa18.34■□□□□ 0.53
HOXC6-202ENST00000394331 LAMTOR1Q6IAA8 161 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms