RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 NTRK2Q16620 822 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 GTPBP8Q8N3Z3 284 aaPredicted RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 DDX1Q92499 740 aaKnown RBP13.13□□□□□ -0.31
USP49-203ENST00000394253 COPS8Q99627 209 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 FUNDC2Q9BWH2 189 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 ENAMQ9NRM1 1142 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 VNN3Q9NY84 501 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 NUDT4Q9NZJ9 180 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 TPST2O60704 377 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 CD47Q08722 323 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 KCND1Q9NSA2 647 aa13.13□□□□□ -0.31
USP49-203ENST00000394253 DUXAA6NLW8 204 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 POU2F1P14859 743 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 FAM160A2Q8N612 972 aaPredicted RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 ASB7Q9H672 318 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 SERINC1Q9NRX5 453 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 A0A0G2JN53 185 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 INMTO95050 263 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 IL1BP01584 269 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 PRPS2P11908 318 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 GNRHRP30968 328 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 MPIP34949 423 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 AIF1P55008 147 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TMEM53Q6P2H8 277 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 NATD1Q8N6N6 113 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ZMIZ2Q8NF64 920 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 OR10A6Q8NH74 314 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 OR10G6Q8NH81 332 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ABHD5Q8WTS1 349 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ELOVL2Q9NXB9 296 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ATG4BQ9Y4P1 393 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ZNF407Q9C0G0 2248 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 BTNL10A8MVZ5 291 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 FAM86B1E9PN63 330 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 OXSR1O95747 527 aaPredicted RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 MT-ND2P03891 347 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TGFB3P10600 412 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ARL9Q6T311 187 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TTLQ8NG68 377 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 LPGAT1Q92604 370 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TFB2MQ9H5Q4 396 aaKnown RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 A2ML1A8K2U0 1454 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 MOXD2PA6NHM9 499 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 RCBTB2O95199 551 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 CRISP3P54108 245 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 NRG1Q02297 640 aaPredicted RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 ENPP2Q13822 863 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 GTF2H2Q13888 395 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 FAM174BQ3ZCQ3 159 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 GTF2H2CQ6P1K8 395 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 SV2AQ7L0J3 742 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ARRDC4Q8NCT1 418 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 CELF1Q92879 486 aaKnown RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 HSPBAP1Q96EW2 488 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 BRF2Q9HAW0 419 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 hCG_2039718K7EN88 272 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 HTR1AP08908 422 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TSPAN8P19075 237 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 IL32P24001 234 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 MAMLD1Q13495 774 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ZNF598Q86UK7 904 aaKnown RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 TRABD2AQ86V40 505 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 OR2AP1Q8NGE2 309 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 MAPK15Q8TD08 544 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 NR4A3Q92570 626 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 MFSD1Q9H3U5 465 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 MOB1AQ9H8S9 216 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 HEBP2Q9Y5Z4 205 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 A8MX80 341 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 NOBOXO60393 691 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TAS2R31P59538 309 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 MLLT1Q03111 559 aaPredicted RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 KLF10Q13118 480 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 SEMA5AQ13591 1074 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 RABL3Q5HYI8 236 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 GSG1LQ6UXU4 331 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TMEM41AQ96HV5 264 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 CD180Q99467 661 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 SCN3AQ9NY46 2000 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 CPS1P31327 1500 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 PAPSS1O43252 624 aaPredicted RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 SGCEO43556 437 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ADRA2BP18089 450 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 UGT8Q16880 541 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TMEM41BQ5BJD5 291 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 TMPRSS7Q7RTY8 843 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 JSRP1Q96MG2 331 aaPredicted RBP13.12□□□□□ -0.31
USP49-203ENST00000394253 ABCG4Q9H172 646 aa13.12□□□□□ -0.31
USP49-203ENST00000394253 ANXA4P09525 319 aaPredicted RBP13.11□□□□□ -0.31
USP49-203ENST00000394253 NUMBP49757 651 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 RAB7AP51149 207 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ART1P52961 327 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
USP49-203ENST00000394253 GK2Q14410 553 aaPredicted RBP13.11□□□□□ -0.31
USP49-203ENST00000394253 LRRC66Q68CR7 880 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 TSSK3Q96PN8 268 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms