RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 FAM25CB3EWG5 89 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 FAM25GB3EWG6 89 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 CCRL2O00421 344 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 PPP6CO00743 305 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 ARHGAP33O14559 1287 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 SLC22A3O75751 556 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 FKBP9O95302 570 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 CD36P16671 472 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 GTF2E2P29084 291 aaKnown RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 HOXA9P31269 272 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 RRM2P31350 389 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 ARL1P40616 181 aaPredicted RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 RING1Q06587 406 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 DGCR6Q14129 220 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 SNAP47Q5SQN1 464 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 TPRG1LQ5T0D9 272 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 HECTD2Q5U5R9 776 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 TIGD7Q6NT04 549 aaPredicted RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 VN1R5Q7Z5H4 357 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 RAB44Q7Z6P3 723 aaPredicted RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 B3GNT8Q7Z7M8 397 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 HS3ST5Q8IZT8 346 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 SMG7Q92540 1137 aaKnown RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 MRPS31Q92665 395 aaKnown RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 CCDC115Q96NT0 180 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 PIF1Q9H611 641 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 ALG9Q9H6U8 611 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 CCNB1IP1Q9NPC3 277 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 SCN3BQ9NY72 215 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 CLEC1BQ9P126 229 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 SLC2A6Q9UGQ3 507 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 TMEFF2Q9UIK5 374 aaPredicted RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 MKLN1Q9UL63 735 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 CAB39Q9Y376 341 aaPredicted RBP10.85□□□□□ -0.67
CUX1-204ENST00000393824 GRIP1Q9Y3R0 1128 aa10.85□□□□□ -0.67
CUX1-204ENST00000393824 BCKDKO14874 412 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 SLC7A4O43246 635 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 TSPAN3O60637 253 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 LINC00032P0C843 101 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 CES1P23141 567 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 HOXC13P31276 330 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ETV6P41212 452 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 POLR2JP52435 117 aaKnown RBP10.84□□□□□ -0.67
CUX1-204ENST00000393824 IL5RAQ01344 420 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 RAPSNQ13702 412 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ANKRD34AQ69YU3 496 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 TXNDC11Q6PKC3 985 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 SPATC1Q76KD6 591 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ARHGAP12Q8IWW6 846 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 BBS7Q8IWZ6 715 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ATPAF2Q8N5M1 289 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 OR5K1Q8NHB7 308 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 FRS2Q8WU20 508 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 RSPRY1Q96DX4 576 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 CARS2Q9HA77 564 aaKnown RBP10.84□□□□□ -0.67
CUX1-204ENST00000393824 PNMA8BQ9ULN7 279 aaPredicted RBP10.84□□□□□ -0.67
CUX1-204ENST00000393824 IGLV3-10A0A075B6K4 115 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 OR2A25A4D2G3 310 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 FGF10O15520 208 aaPredicted RBP10.84□□□□□ -0.67
CUX1-204ENST00000393824 HS6ST1O60243 411 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ACSL4O60488 711 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 MED26O95402 600 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 MT-CYBP00156 380 aaPredicted RBP10.84□□□□□ -0.67
CUX1-204ENST00000393824 MT-ND2P03891 347 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 TRAPPC2P0DI81 140 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 TRAPPC2BP0DI82 140 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 MAGP20916 626 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 TGFBR1P36897 503 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 DCTP40126 519 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 UFM1P61960 85 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 YIF1BQ5BJH7 314 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ZNF789Q5FWF6 425 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 SPESP1Q6UW49 350 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 TMEM207Q6UWW9 146 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 DLEU7Q6UYE1 221 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 EFL1Q7Z2Z2 1120 aaKnown RBP10.84□□□□□ -0.67
CUX1-204ENST00000393824 ADHFE1Q8IWW8 467 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ELMOD2Q8IZ81 293 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 CMTM8Q8IZV2 173 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 NLGN4XQ8N0W4 816 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 AMER2Q8N7J2 671 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 PSD4Q8NDX1 1056 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 TOR1AIP2Q8NFQ8 470 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 OR52E4Q8NGH9 312 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 SLC38A4Q969I6 547 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 PDLIM5Q96HC4 596 aaKnown RBP10.84□□□□□ -0.67
CUX1-204ENST00000393824 C1orf74Q96LT6 269 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 SIGLEC11Q96RL6 698 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 FSD1LQ9BXM9 530 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 POPDC3Q9HBV1 291 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 EXD2Q9NVH0 621 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ZIM2Q9NZV7 527 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 CFAP97Q9P2B7 532 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 FBXO10Q9UK96 956 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 CLEC4EQ9ULY5 219 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 WBP11Q9Y2W2 641 aaKnown RBP10.84□□□□□ -0.67
CUX1-204ENST00000393824 PCDHB14Q9Y5E9 798 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 PCDHGB6Q9Y5F9 930 aa10.84□□□□□ -0.67
CUX1-204ENST00000393824 ACTL7AQ9Y615 435 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms