RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 AASDHPPTQ9NRN7 309 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 SH2B3Q9UQQ2 575 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 DMTF1Q9Y222 760 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 PCDHGA11Q9Y5H2 935 aa8.36□□□□□ -1.07
TDP1-203ENST00000393454 TRBV23OR9-2A0A075B6M9 112 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 A0A088AWK7 358 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 IGHV1OR15-9A0A0B4J2B8 117 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 FBP2O00757 339 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 TNFRSF10CO14798 259 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 SH3BGRLO75368 114 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 PDE5AO76074 875 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 ATP6V1G2O95670 118 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 TNFP01375 233 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 C1GALT1C1LP0DN25 315 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 CASP2P42575 452 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 POLR2JP52435 117 aaKnown RBP8.35□□□□□ -1.07
TDP1-203ENST00000393454 GRIK2Q13002 908 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 SLBPQ14493 270 aaKnown RBP eCLIP8.35□□□□□ -1.07
TDP1-203ENST00000393454 ARHGAP19Q14CB8 494 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 ALG11Q2TAA5 492 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 PAGE2BQ5JRK9 111 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 ATG9BQ674R7 924 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 MED27Q6P2C8 311 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 BLOC1S3Q6QNY0 202 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 NXPE4Q6UWF7 544 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 LCTLQ6UWM7 567 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 ABI3BPQ7Z7G0 1075 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 ZFAND4Q86XD8 727 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 PHACTR4Q8IZ21 702 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 LIX1Q8N485 282 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 PCYOX1LQ8NBM8 494 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 CCL4L1Q8NHW4 92 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 SMPDL3AQ92484 453 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 REPS1Q96D71 796 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 CMTM7Q96FZ5 175 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 TEX37Q96LM6 180 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 CDRT15Q96T59 188 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 HAUS8Q9BT25 410 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 XKR8Q9H6D3 395 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 MVB12BQ9H7P6 319 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 IL1RL2Q9HB29 575 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 ZIM2Q9NZV7 527 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 SCHIP1Q9P0W5 487 aaPredicted RBP8.35□□□□□ -1.07
TDP1-203ENST00000393454 SPATA7Q9P0W8 599 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 TBC1D29Q9UFV1 150 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 TAC3Q9UHF0 121 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 NDUFAF1Q9Y375 327 aa8.35□□□□□ -1.07
TDP1-203ENST00000393454 PRAMEF33A0A0G2JMD5 474 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 A0A1W2PPC4 97 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 FAM234BA2RU67 622 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 CCDC154A6NI56 674 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 BBIP1A8MTZ0 92 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 H0YIV9 168 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 TOR1BO14657 336 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 RSL1D1O76021 490 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 DCNP07585 359 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 THEGLP0DJG4 465 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 MTHFD1P11586 935 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 CDH1P12830 882 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 CAPN3P20807 821 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 RAP1GDS1P52306 607 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 MEF2AQ02078 507 aaPredicted RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 MTAPQ13126 283 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 LRP8Q14114 963 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 KPNB1Q14974 876 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 CYP2A13Q16696 494 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 SMU1Q2TAY7 513 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 ZNF542PQ5EBM4 170 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 WASHC2DQ5SRD0 308 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 C1orf146Q5VVC0 180 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 BNC2Q6ZN30 1099 aaPredicted RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 C17orf64Q86WR6 236 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 UBALD2Q8IYN6 164 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PGAM4Q8N0Y7 254 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 SPEM1Q8N4L4 309 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 OR7G3Q8NG95 312 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 WDR20Q8TBZ3 569 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 VPS33AQ96AX1 596 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 CCDC124Q96CT7 223 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 SPDL1Q96EA4 605 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 KLHDC7BQ96G42 594 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 APOLD1Q96LR9 279 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 SERPINI1Q99574 410 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 ZBTB18Q99592 522 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 EFCAB11Q9BUY7 163 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PCBD2Q9H0N5 130 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 GEMIN8Q9NWZ8 242 aaKnown RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 ADA2Q9NZK5 511 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 SLC7A8Q9UHI5 535 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PACSIN3Q9UKS6 424 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PNMA8BQ9ULN7 279 aaPredicted RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.34□□□□□ -1.07
TDP1-203ENST00000393454 HEBP2Q9Y5Z4 205 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 COLEC10Q9Y6Z7 277 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PIPSLA2A3N6 862 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 PRR19A6NJB7 356 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 KDM1AO60341 852 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 ENTPD5O75356 428 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 EML2O95834 649 aa8.34□□□□□ -1.07
TDP1-203ENST00000393454 ERGP11308 486 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms