RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ARMC8Q8IUR7 673 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 WDR83Q9BRX9 315 aaKnown RBP16.05■□□□□ 0.16
SNX9-201ENST00000392185 REXO4Q9GZR2 422 aaKnown RBP16.05■□□□□ 0.16
SNX9-201ENST00000392185 MAT2BQ9NZL9 334 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 ZIM2Q9NZV7 527 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 LHX3Q9UBR4 397 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 CABIN1Q9Y6J0 2220 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 PIPSLA2A3N6 862 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 PDLIM1O00151 329 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 SLC22A2O15244 555 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 TP73O15350 636 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 ADH1BP00325 375 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 ENO2P09104 434 aaPredicted RBP16.05■□□□□ 0.16
SNX9-201ENST00000392185 IMPDH2P12268 514 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 PAICSP22234 425 aaKnown RBP16.05■□□□□ 0.16
SNX9-201ENST00000392185 CAPZA2P47755 286 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 STXBP1P61764 594 aaKnown RBP16.05■□□□□ 0.16
SNX9-201ENST00000392185 MYRFLQ96LU7 910 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 SLC29A3Q9BZD2 475 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 COQ10BQ9H8M1 238 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 EXD2Q9NVH0 621 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 TCRBV21S2A2A0A5A6 115 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 GLOD5A6NK44 160 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 SNNO75324 88 aaPredicted RBP16.05■□□□□ 0.16
SNX9-201ENST00000392185 GPIP06744 558 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 CCNYL3P0C7X3 344 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 SLC9A5Q14940 896 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 ERICH5Q6P6B1 374 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 TICAM1Q8IUC6 712 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 RELTQ969Z4 430 aa16.05■□□□□ 0.16
SNX9-201ENST00000392185 SLC7A6OSQ96CW6 309 aaPredicted RBP16.05■□□□□ 0.16
SNX9-201ENST00000392185 QSER1Q2KHR3 1735 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 DOCK5Q9H7D0 1870 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 TPST2O60704 377 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 RNGTTO60942 597 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 PDE9AO76083 593 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 JUNP05412 331 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 ZNF140P52738 457 aaPredicted RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 EMX2Q04743 252 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 EPS8Q12929 822 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 MRPL58Q14197 206 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 ABRAXAS2Q15018 415 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 HNRNPA1L2Q32P51 320 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 USP39Q53GS9 565 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 FAM78AQ5JUQ0 283 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 CCSAPQ6IQ19 270 aaPredicted RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 CNPPD1Q9BV87 410 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 TPSD1Q9BZJ3 242 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 TRIM39Q9HCM9 518 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 AKAP7Q9P0M2 348 aaPredicted RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 SUCOQ9UBS9 1254 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 CLEC4EQ9ULY5 219 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 CFIP05156 583 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 ENGP17813 658 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 PRDX3P30048 256 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 ADRA1AP35348 466 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 DHPSP49366 369 aaPredicted RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 NUDT13Q86X67 352 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 ZDHHC21Q8IVQ6 265 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 CENPNQ96H22 339 aaPredicted RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 RBM18Q96H35 190 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 TRAPPC9Q96Q05 1148 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 ARPC2O15144 300 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 ERN1O75460 977 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 SCELO95171 688 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 SLC16A8O95907 504 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 RPS21P63220 83 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 C1DQ13901 141 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 NCF4Q15080 339 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 CXorf57Q6NSI4 855 aaKnown RBP16.04■□□□□ 0.16
SNX9-201ENST00000392185 ZNF540Q8NDQ6 660 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 RAB7BQ96AH8 199 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 MYEOVQ96EZ4 313 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 GPR174Q9BXC1 333 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 DLGAP4Q9Y2H0 992 aa16.04■□□□□ 0.16
SNX9-201ENST00000392185 PDPK1O15530 556 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 POLR2CP19387 275 aaPredicted RBP16.03■□□□□ 0.16
SNX9-201ENST00000392185 IFNGR2P38484 337 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 PXNP49023 591 aaPredicted RBP16.03■□□□□ 0.16
SNX9-201ENST00000392185 DLG1Q12959 904 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 DPY19L1Q2PZI1 675 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 RNF44Q7L0R7 432 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 PARS2Q7L3T8 475 aaKnown RBP16.03■□□□□ 0.16
SNX9-201ENST00000392185 SFRP1Q8N474 314 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 KRTCAP2Q8N6L1 136 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 OARD1Q9Y530 152 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 ARID1BQ8NFD5 2236 aaPredicted RBP16.03■□□□□ 0.16
SNX9-201ENST00000392185 GMFGO60234 142 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 ALPPL2P10696 532 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 DOC2AQ14183 400 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 SHHQ15465 462 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 TANGO2Q6ICL3 276 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 CYP4Z2PQ8N1L4 340 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 ZBED6CLQ96FA7 236 aaPredicted RBP16.03■□□□□ 0.16
SNX9-201ENST00000392185 CCDC106Q9BWC9 280 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 ENOPH1Q9UHY7 261 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 PDE10AQ9Y233 779 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 LOC100506127A0A0U1RQW1 187 aa16.03■□□□□ 0.16
SNX9-201ENST00000392185 PRKD3O94806 890 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms