RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CCDC32Q9BV29 185 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 WRAP73Q9P2S5 460 aaPredicted RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 URADA6NGE7 173 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 DFNA5O60443 496 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 ECI2O75521 394 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 SSR2P43308 183 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 HNRNPFP52597 415 aaKnown RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 NUDT6P53370 316 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 LAPTM5Q13571 262 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 SEMA3AQ14563 771 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 PAFAH1B3Q15102 231 aaKnown RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 FBXO46Q6PJ61 603 aaPredicted RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 RTL4Q6ZR62 310 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 ASB18Q6ZVZ8 466 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 PLD6Q8N2A8 252 aaKnown RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 PHC3Q8NDX5 983 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 WDR48Q8TAF3 677 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 CAMK1GQ96NX5 476 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 AIF1LQ9BQI0 150 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 FFAR2O15552 330 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 HMGN1P05114 100 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 NAE1Q13564 534 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 TARBP2Q15633 366 aaKnown RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF767PQ75MW2 155 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 OR8J3Q8NGG0 315 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 FNIP2Q9P278 1114 aa19.22■□□□□ 0.67
SHANK1-203ENST00000391813 TRPM3Q9HCF6 1732 aaPredicted RBP19.22■□□□□ 0.67
SHANK1-203ENST00000391813 NFATC1O95644 943 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 SRPRAP08240 638 aaKnown RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 SAGP10523 405 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 LAMP2P13473 410 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF24P17028 368 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 COQ5Q5HYK3 327 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 ADGRD2Q7Z7M1 963 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 MARCH9Q86YJ5 346 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 SIDT2Q8NBJ9 832 aaKnown RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 TBL1XO60907 577 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 NUDT14O95848 222 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 RBM34P42696 430 aaKnown RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 NANOGP8Q6NSW7 305 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF367Q7RTV3 350 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 CPA6Q8N4T0 437 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 OXR1Q8N573 874 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 NAT16Q8N8M0 369 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 IL4I1Q96RQ9 567 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 RANBP3Q9H6Z4 567 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 NANOGQ9H9S0 305 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 TIGARQ9NQ88 270 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 POLE4Q9NR33 117 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 PCDHB3Q9Y5E6 796 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 SETD1AO15047 1707 aaKnown RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 GSTM3P21266 225 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 CHRNA4P43681 627 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 JAG1P78504 1218 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 PMS2P3Q13401 168 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 ZNF234Q14588 700 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 TCEA2Q15560 299 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 LCN8Q6JVE9 175 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 CYP4V2Q6ZWL3 525 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 SLC15A3Q8IY34 581 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 CCDC107Q8WV48 283 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 SHISA4Q96DD7 197 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 HCN2Q9UL51 889 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 A0A1W2PQ67 120 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 H3BMQ9 156 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 OXSR1O95747 527 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 FAM163BP0C2L3 166 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 GSTT2P0CG29 244 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 HSD17B1P14061 328 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 FUBP3Q96I24 572 aaKnown RBP eCLIP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 COG8Q96MW5 612 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 SLC29A3Q9BZD2 475 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 RC3H2Q9HBD1 1191 aaKnown RBP19.21■□□□□ 0.67
SHANK1-203ENST00000391813 GOLGA2P5Q9HBQ8 144 aa19.21■□□□□ 0.67
SHANK1-203ENST00000391813 INSIG1O15503 277 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 ETV4P43268 484 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 PQLC3Q8N755 202 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 GALPQ9UBC7 116 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 PCDHGB6Q9Y5F9 930 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 PTPN2P17706 415 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 PRKACGP22612 351 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 LILRA4P59901 499 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 TAF10Q12962 218 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 SLC10A6Q3KNW5 377 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 UBE2Q1Q7Z7E8 422 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 ASPNQ9BXN1 380 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 GPR88Q9GZN0 384 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 FBRSL1Q9HCM7 1045 aaKnown RBP19.2■□□□□ 0.66
SHANK1-203ENST00000391813 ARMC1Q9NVT9 282 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 KRBA1A5PL33 1030 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 M0R233 179 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 ENGP17813 658 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 CCND3P30281 292 aaPredicted RBP19.2■□□□□ 0.66
SHANK1-203ENST00000391813 TAF13Q15543 124 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 PPP2R2DQ66LE6 453 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 TPGS2Q68CL5 300 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 EIF5AL1Q6IS14 154 aaKnown RBP19.2■□□□□ 0.66
SHANK1-203ENST00000391813 LINGO2Q7L985 606 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 TMEM192Q8IY95 271 aa19.2■□□□□ 0.66
SHANK1-203ENST00000391813 SCLYQ96I15 445 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms