RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TRIM49P0CI25 452 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 TRIM49CP0CI26 452 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SLC2A2P11168 524 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 IRF2P14316 349 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 GATA1P15976 413 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SP100P23497 879 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 DNASE1P24855 282 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 EDNRAP25101 427 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SHC1P29353 583 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 HLA-FP30511 346 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 OPRL1P41146 370 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 RPL21P46778 160 aaKnown RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 LMAN1P49257 510 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 PAX9P55771 341 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 CALCOCO2Q13137 446 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SQLEQ14534 574 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SLC1A5Q15758 541 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 NPTX1Q15818 432 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 ZNF74Q16587 644 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 PHKG1Q16816 387 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 UGP2Q16851 508 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SNAI3Q3KNW1 292 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 MCMDC2Q4G0Z9 681 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 C9orf152Q5JTZ5 239 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 ERMARDQ5T6L9 678 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 WLSQ5T9L3 541 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 BSPRYQ5W0U4 402 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 C16orf54Q6UWD8 224 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 MMD2Q8IY49 270 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 NDUFAF2Q8N183 169 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SPEM1Q8N4L4 309 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 AMER3Q8N944 861 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 POMGNT2Q8NAT1 580 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 KBTBD8Q8NFY9 601 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 OR10Q1Q8NGQ4 319 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 OR13C3Q8NGS6 347 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 FAM222BQ8WU58 562 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 SYN2Q92777 582 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 ANKRD9Q96BM1 317 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 NXNL1Q96CM4 212 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 FAM71F1Q96KD3 344 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 LINC00615Q96LM1 132 aaPredicted RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 C4orf45Q96LM5 186 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 FOXN4Q96NZ1 517 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 PIGQQ9BRB3 760 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 OVOL2Q9BRP0 275 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 KLHL4Q9C0H6 718 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 GOLPH3LQ9H4A5 285 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 CDH20Q9HBT6 801 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 CPSF2Q9P2I0 782 aaKnown RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 RPS6KA6Q9UK32 745 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 PPIEQ9UNP9 301 aaKnown RBP1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 WDR83OSQ9Y284 106 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 RPS6KL1Q9Y6S9 549 aa1.93□□□□□ -2.1
RNU6-541P-201ENST00000384709 LOC105371242A0A075B767 164 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 A0A087WUV0 522 aaPredicted RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 TRAV24A0A0B4J272 114 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 EDDM13A0A1B0GTR0 161 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 TRBC2A0A5B9 178 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 CCDC188H7C350 402 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 MEIS2O14770 477 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 DDHD2O94830 711 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 STARD3NLO95772 234 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 ATP5BP06576 529 aaKnown RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 CD22P20273 847 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 JAK1P23458 1154 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 GATA2P23769 480 aaPredicted RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 PCGF2P35227 344 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 DSCR10P59022 87 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 ELAVL2Q12926 359 aaKnown RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 HNRNPDQ14103 355 aaKnown RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 RALBP1Q15311 655 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 TAB1Q15750 504 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 EXT1Q16394 746 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 LCN1P1Q5VSP4 162 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 GPR139Q6DWJ6 353 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 SPINK14Q6IE38 97 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 NAA16Q6N069 864 aaPredicted RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 DOK6Q6PKX4 331 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 FRRS1Q6ZNA5 592 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 PLPPR4Q7Z2D5 763 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 ARHGAP22Q7Z5H3 698 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 PTAR1Q7Z6K3 402 aaPredicted RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 LRRTM1Q86UE6 522 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 ERC1Q8IUD2 1116 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 PHC2Q8IXK0 858 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 RAB42Q8N4Z0 105 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 FAM89BQ8N5H3 189 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 RASGEF1AQ8N9B8 481 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 OR4K1Q8NGD4 311 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 MAPK15Q8TD08 544 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 SMAP2Q8WU79 429 aaPredicted RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 PRICKLE1Q96MT3 831 aaPredicted RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 AGAP3Q96P47 875 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 LPAR4Q99677 370 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 CPNE1Q99829 537 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 URM1Q9BTM9 101 aaKnown RBP1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 PANK2Q9BZ23 570 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 UBXN6Q9BZV1 441 aa1.92□□□□□ -2.1
RNU6-541P-201ENST00000384709 ZMYND12Q9H0C1 365 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms