RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 FRG2Q64ET8 278 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 DUS1LQ6P1R4 473 aaKnown RBP8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 MED27Q6P2C8 311 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 ZC3H14Q6PJT7 736 aaKnown RBP8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 NXPE4Q6UWF7 544 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 SUSD1Q6UWL2 747 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 SLCO4C1Q6ZQN7 724 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 CCDC121Q6ZUS5 278 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 MAVSQ7Z434 540 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 TRIM46Q7Z4K8 759 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 TMPRSS11BQ86T26 416 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 MTDHQ86UE4 582 aaKnown RBP8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 FAM9CQ8IZT9 166 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 NAGSQ8N159 534 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 ZNF548Q8NEK5 533 aaPredicted RBP8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 ABHD11Q8NFV4 315 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 SELENOMQ8WWX9 145 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 PIGKQ92643 395 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 USP7Q93009 1102 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 NEIL2Q969S2 332 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 TUBGCP3Q96CW5 907 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 IL17FQ96PD4 163 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 CDK15Q96Q40 435 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 FRG2BQ96QU4 278 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 AIF1LQ9BQI0 150 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 EBF4Q9BQW3 602 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 DUSP23Q9BVJ7 150 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 BRF2Q9HAW0 419 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 TNFRSF12AQ9NP84 129 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 SAR1AQ9NR31 198 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 TMEM184CQ9NVA4 438 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 RAB23Q9ULC3 237 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 ZNF490Q9ULM2 529 aaPredicted RBP8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 PLAGL1Q9UM63 463 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 ICKQ9UPZ9 632 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 TIMM22Q9Y584 194 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 PCDHGA5Q9Y5G8 931 aa8.55□□□□□ -1.04
RNU1-28P-201ENST00000383861 ATXN2Q99700 1313 aaKnown RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 KCNE1BA0A087WTH5 132 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 A0A1B0GTL3 188 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 A0A1W2PPV9 198 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 PIPSLA2A3N6 862 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 C2orf74A8MZ97 194 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 PRR33A8MZF0 331 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 B4DGG1 531 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 E7EQ34 232 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 NPIPB8E9PQR5 432 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 TNFRSF10AO00220 468 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 FOXE1O00358 373 aaPredicted RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 FCHO1O14526 889 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 UBDO15205 165 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 GALR2O43603 387 aaPredicted RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 GPR37L1O60883 481 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 EML2O95834 649 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 CHRM5P08912 532 aaPredicted RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 LINC00032P0C843 101 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ALPPL2P10696 532 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 EZRP15311 586 aaKnown RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 NCF2P19878 526 aaPredicted RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 PIK3CBP42338 1070 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 RASSF2P50749 326 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ATP4BP51164 291 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 STX1BP61266 288 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 GRIK2Q13002 908 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 TUBB3Q13509 450 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 KRT72Q14CN4 511 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 SF1Q15637 639 aaKnown RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ZRSR2Q15696 482 aaKnown RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 GSTA3Q16772 222 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ZNF423Q2M1K9 1284 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ATP6AP1LQ52LC2 224 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 XKR7Q5GH72 579 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ICE2Q659A1 982 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 OGFOD2Q6N063 350 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ARMC6Q6NXE6 501 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 LAYNQ6UX15 382 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 TMEM26Q6ZUK4 368 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 CHSY3Q70JA7 882 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 LARP4Q71RC2 724 aaKnown RBP eCLIP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 CLNKQ7Z7G1 428 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 OOSP2Q86WS3 158 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 C17orf82Q86X59 251 aaPredicted RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 LAS2Q8IYD9 372 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 CPSF7Q8N684 471 aaKnown RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 LMNTD1Q8N9Z9 388 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 LINC01555Q8NAE3 123 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 TTLQ8NG68 377 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 OR4E2Q8NGC2 313 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 OR6C4Q8NGE1 309 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 SLC37A2Q8TED4 501 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ERP27Q96DN0 273 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 KCNA7Q96RP8 456 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 PRRX2Q99811 253 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 MYLK2Q9H1R3 596 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 EPB41L1Q9H4G0 881 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 WDR55Q9H6Y2 383 aaPredicted RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 AKTIPQ9H8T0 292 aa8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 MRPS30Q9NP92 439 aaKnown RBP8.54□□□□□ -1.04
RNU1-28P-201ENST00000383861 ABCF3Q9NUQ8 709 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms