RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 CEP350Q5VT06 3117 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 COL4A4P53420 1690 aaPredicted RBP3.66□□□□□ -1.82
SMC6-202ENST00000381272 CROCCQ5TZA2 2017 aa3.66□□□□□ -1.82
SMC6-202ENST00000381272 CCDC162PA2VCL2 907 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 PRORSD1PA6NEY8 169 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 GLTPD2A6NH11 291 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 M0QZQ0 153 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 UBXN8O00124 270 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 PLOD2O00469 737 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 CLGNO14967 610 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 CD3EAPO15446 510 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 TIPRLO75663 272 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SOAT2O75908 522 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SRP72O76094 671 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 RTN3O95197 1032 aaPredicted RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 SIX3O95343 332 aaPredicted RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 GPANK1O95872 356 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 GOT2P00505 430 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 ELANEP08246 267 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 RBP1P09455 135 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ALDOCP09972 364 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 FAM58BPP0C7Q3 252 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 LINC00032P0C843 101 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 HSPA1AP0DMV8 641 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 HSPA1BP0DMV9 641 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 CKBP12277 381 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ZNF26P17031 533 aaPredicted RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 IMPDH1P20839 514 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 GPX3P22352 226 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SLC6A2P23975 617 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 RPL5P46777 297 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 RENBPP51606 427 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 CLCN5P51795 746 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SLC7A2P52569 658 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 FOXA1P55317 472 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ARPP19P56211 112 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 NANOS3P60323 173 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 CTXN1P60606 82 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 PRAMEP78395 509 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 TIAL1Q01085 375 aaKnown RBP eCLIP3.65□□□□□ -1.82
SMC6-202ENST00000381272 OCA2Q04671 838 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 MGAT3Q09327 533 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 DYNC1I2Q13409 638 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 GALNT3Q14435 633 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 CAPRIN1Q14444 709 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 SEMA3AQ14563 771 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 LPIN1Q14693 890 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 CYTH1Q15438 398 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 OR4D1Q15615 310 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 KIF19Q2TAC6 998 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 VPS26BQ4G0F5 336 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 FBXO48Q5FWF7 155 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 MS4A13Q5J8X5 152 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ZNF678Q5SXM1 525 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ARMC3Q5W041 872 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 B3GNTL1Q67FW5 361 aaPredicted RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 RAP1GAP2Q684P5 730 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 CYHR1Q6ZMK1 362 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ISCA2Q86U28 154 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SERINC5Q86VE9 423 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ZNF280BQ86YH2 543 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 FUNDC1Q8IVP5 155 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 CCDC117Q8IWD4 279 aaPredicted RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 ZNF683Q8IZ20 524 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 MYO1HQ8N1T3 1032 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SCML4Q8N228 414 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 PTGR2Q8N8N7 351 aaPredicted RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 NLGN4YQ8NFZ3 816 aaPredicted RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 OR13C4Q8NGS5 318 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ARRDC2Q8TBH0 407 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 BLOC1S5Q8TDH9 187 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 DIS3LQ8TF46 1054 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 DGCR14Q96DF8 476 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 ASB9Q96DX5 294 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 DNAJC1Q96KC8 554 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 B3GALT6Q96L58 329 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 UBXN10Q96LJ8 280 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 C8orf48Q96LL4 319 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 TBATAQ96M53 351 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SMIM14Q96QK8 99 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 RANBP9Q96S59 729 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SLC29A1Q99808 456 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 CIB1Q99828 191 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 SYT17Q9BSW7 474 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 TRIM62Q9BVG3 475 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ALOXE3Q9BYJ1 711 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 MRPS26Q9BYN8 205 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 SLC2A11Q9BYW1 496 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ASPSCR1Q9BZE9 553 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 ZYG11BQ9C0D3 744 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 NOL11Q9H8H0 719 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 VCX3AQ9NNX9 186 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 VPS45Q9NRW7 570 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 RGS18Q9NS28 235 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 UTP6Q9NYH9 597 aaKnown RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 EPS15L1Q9UBC2 864 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 UXTQ9UBK9 157 aaPredicted RBP3.65□□□□□ -1.82
SMC6-202ENST00000381272 CD300AQ9UGN4 299 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 TUBD1Q9UJT1 453 aa3.65□□□□□ -1.82
SMC6-202ENST00000381272 BTRCQ9Y297 605 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms